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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 30-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae R6
- locus tag: spr0155 [new locus tag: SPR_RS00840 ]
- pan locus tag?: PNEUPAN000873000
- symbol: spr0155
- pan gene symbol?: —
- synonym:
- product: Hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: spr0155 [new locus tag: SPR_RS00840 ]
- symbol: spr0155
- product: Hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 163827..164408
- length: 582
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: AE007317 (163827..164408) NCBI
- BioCyc: SPR0155 BioCyc
- MicrobesOnline: 133040 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_0159 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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481
541TTGTATTCCTTTACAAAAGGTGCTATAATATTATCAGGAGGTTCTATCATGAAAAAGAAA
CCAATTTATCTATGGGTCTTGCTAATCTTGTCTGCCCTTATTTCAGTTCCGTCTCTGTTT
GGAATTGTGAGTCCCTTGCCTAGTAAAGAAGCCCTTCGTGCTGCTCAGAAACAAGTTGCA
GGGGTCAATGCTCAGCAATTAGAAGACCAGCTTAATTATACCTATAGAGTAGCAGAAGCA
TCTCATTCTATTTTTAATGTTGCTTTGATTGTGCTATCTACTATTTTAGTGGTCGTAGCG
ATTGTCTTCCTTGTTCGTAAAAATTTGCAATATGCAAACTATACTTACGTTGGCTATGTT
TTGTTAGCTATTATTGGTTCGATTTATGGCTATGTTGGTTTACAAGACGCTGTGCAGTTG
GTTCAAGATGAGAGCATGCGTTTGACAGTGAGTATTGGTTCAAAAGCTGTTAGCATTTTC
TATATCGTCATCAATGTTCTCTTCCTAGCCCTTGTCTTCTATAAGATGTGGCGACAACAG
AAAGCCTTGGCAGAAGAAGAGGAAACAGAAGAGCTTACCTAA60
120
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540
582
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: spr0155 [new locus tag: SPR_RS00840 ]
- symbol: spr0155
- description: Hypothetical protein
- length: 193
- theoretical pI: 9.08538
- theoretical MW: 21432.1
- GRAVY: 0.625907
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- FIG01114268: hypothetical protein
- PFAM: no clan defined DUF3169; Protein of unknown function (DUF3169) (PF11368; HMM-score: 21.6)OSTbeta; Organic solute transporter subunit beta protein (PF15048; HMM-score: 19.5)and 17 moreDUF2157; Predicted membrane protein (DUF2157) (PF09925; HMM-score: 16.4)DHHC; DHHC palmitoyltransferase (PF01529; HMM-score: 14.7)DUF4052; Protein of unknown function (DUF4052) (PF13261; HMM-score: 14)PspB; Phage shock protein B (PF06667; HMM-score: 13.9)2heme_cytochrom (CL0328) DUF2231; Predicted membrane protein (DUF2231) (PF09990; HMM-score: 13.1)no clan defined DUF4337; Domain of unknown function (DUF4337) (PF14235; HMM-score: 12.8)GPCR_A (CL0192) Ceramidase; Ceramidase (PF05875; HMM-score: 12.1)no clan defined Trp_oprn_chp; Tryptophan-associated transmembrane protein (Trp_oprn_chp) (PF09534; HMM-score: 12.1)DUF3671; Protein of unknown function (PF12420; HMM-score: 10.6)MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 (PF15807; HMM-score: 10.6)DUF846; Eukaryotic protein of unknown function (DUF846) (PF05832; HMM-score: 9.1)Renin_r; Renin receptor-like protein (PF07850; HMM-score: 8.6)Jagunal; Jagunal, ER re-organisation during oogenesis (PF07086; HMM-score: 8)DUF202; Domain of unknown function (DUF202) (PF02656; HMM-score: 7.7)SLATT (CL0676) DUF4231; Protein of unknown function (DUF4231) (PF14015; HMM-score: 7.6)no clan defined DUF2207; Predicted membrane protein (DUF2207) (PF09972; HMM-score: 7.2)DUF4282; Domain of unknown function (DUF4282) (PF14110; HMM-score: 7.2)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 4
- DeepLocPro: Cytoplasmic Membrane
- Cytoplasmic Score: 0.0004
- Cytoplasmic Membrane Score: 0.9041
- Cell wall & surface Score: 0.0006
- Extracellular Score: 0.0949
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.330852
- TAT(Tat/SPI): 0.004416
- LIPO(Sec/SPII): 0.028721
- predicted transmembrane helices (TMHMM): 4
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MYSFTKGAIILSGGSIMKKKPIYLWVLLILSALISVPSLFGIVSPLPSKEALRAAQKQVAGVNAQQLEDQLNYTYRVAEASHSIFNVALIVLSTILVVVAIVFLVRKNLQYANYTYVGYVLLAIIGSIYGYVGLQDAVQLVQDESMRLTVSIGSKAVSIFYIVINVLFLALVFYKMWRQQKALAEEEETEELT
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: hk07 > rr07 > spr0155 > spr0156
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0159 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.