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serotype 4
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D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
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serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
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ATCC 49619
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ATCC 700669
serotype 23F
BM6001
serotype 19F
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CGSP14
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G54
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HU-OH
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Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 30-JAN-2014

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae R6
  • locus tag: spr0409 [new locus tag: SPR_RS02095 ]
  • pan locus tag?: PNEUPAN001300000
  • symbol: glnH
  • pan gene symbol?: glnHP1
  • synonym:
  • product: ABC transporter substrate binding protein - glutamine transport

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: spr0409 [new locus tag: SPR_RS02095 ]
  • symbol: glnH
  • product: ABC transporter substrate binding protein - glutamine transport
  • replicon: chromosome
  • strand: -
  • coordinates: 404650..405585
  • length: 936
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGATTCAAGTAGAACCTGGTTTCAAAACTGGGGAAGAAGATACAGCTATCGCTATCGGG
    CTTCGTAAAAATGACAATCGTATTAGCCAAATCAATGCCAGCATTGAAACCATTTCAAAA
    GATGACCAAGTTGCCTTGATGGATCGTATGATCAAGGAACAACCTGCCGAAGCTACAACA
    ACTGAAGAGACTAGCAGTAGTTTCTTTAGCCAAGTTGCTAAAATTCTTTCTGAAAACTGG
    CAACAACTCTTGCGTGGTGCTGGTATCACTCTTTTAATCTCTATCGTCGGAACCATCATA
    GGTCTCATTATTGGACTTGCCATTGGTGTCTTCCGTACTGCTCCTCTCTCTGAAAACAAA
    GTCATTTACGGCCTACAAAAACTAGTCGGCTGGGTTCTCAATGTCTACATTGAAATTTTC
    CGTGGTACGCCAATGATTGTTCAATCGATGGTTATCTACTATGGAACTGCCCAAGCTTTC
    GGGATCAACCTTGACCGTACACTGGCTGCTATCTTCATCGTTTCAATCAATACCGGTGCC
    TACATGACTGAAATCGTCCGTGGTGGTATCCTAGCAGTTGACAAGGGACAATTTGAAGCT
    GCGACTGCTCTTGGTATGACCCATAACCAGACCATGCGTAAGATTGTCCTACCTCAGGTA
    GTCCGTAACATCCTACCTGCAACTGGTAATGAATTTGTCATCAATATCAAAGATACATCT
    GTATTGAACGTTATCTCTGTTGTCGAACTTTATTTCTCAGGAAATACCGTGGCAACACAA
    ACCTATCAATACTTCCAGACATTTACAATCATCGCCGTGATTTACTTTGTCCTCACCTTC
    ACCGTAACACGTATCCTACGCTTTATCGAGCGCAGAATGGACATGGATACCTACACTACA
    GGTGCTAACCAAATGCAAACGGAGGATTTGAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    936

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: spr0409 [new locus tag: SPR_RS02095 ]
  • symbol: GlnH
  • description: ABC transporter substrate binding protein - glutamine transport
  • length: 311
  • theoretical pI: 5.1411
  • theoretical MW: 34492.8
  • GRAVY: 0.27492

⊟Function[edit | edit source]

  • TIGRFAM:
    ectoine/hydroxyectoine ABC transporter, permease protein EhuD (TIGR03003; HMM-score: 145.4)
    ectoine/hydroxyectoine ABC transporter, permease protein EhuC (TIGR03004; HMM-score: 144.2)
    and 8 more
    Metabolism Transport and binding proteins Amino acids, peptides and amines amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family (TIGR01726; HMM-score: 75.5)
    Metabolism Transport and binding proteins Anions phosphonate ABC transporter, permease protein PhnE (TIGR01097; HMM-score: 52.1)
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, permease protein PstA (TIGR00974; HMM-score: 26.7)
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, permease protein PstC (TIGR02138; HMM-score: 23.3)
    Metabolism Transport and binding proteins Anions molybdate ABC transporter, permease protein (TIGR02141; HMM-score: 17.9)
    NifC-like ABC-type porter (TIGR01581; HMM-score: 17.7)
    choline ABC transporter, permease protein (TIGR03416; HMM-score: 16)
    2-aminoethylphosphonate ABC transporter, permease protein (TIGR03226; HMM-score: 14.5)
  • TheSEED  :
    • Arginine ABC transporter, substrate-binding and permease protein
  • PFAM:
    BPD_transp_1 (CL0404) BPD_transp_1; Binding-protein-dependent transport system inner membrane component (PF00528; HMM-score: 73.2)
    and 1 more
    no clan defined DUF4349; Domain of unknown function (DUF4349) (PF14257; HMM-score: 13)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.01
    • Cytoplasmic Membrane Score: 9.99
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 2
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 1
    • Cell wall & surface Score: 0
    • Extracellular Score: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.005668
    • TAT(Tat/SPI): 0.001177
    • LIPO(Sec/SPII): 0.001029
  • predicted transmembrane helices (TMHMM): 5

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MIQVEPGFKTGEEDTAIAIGLRKNDNRISQINASIETISKDDQVALMDRMIKEQPAEATTTEETSSSFFSQVAKILSENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRMDMDTYTTGANQMQTEDLK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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