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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 24-MAR-2021

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae BVJ1JL
  • locus tag: JN057_RS01695 [old locus tag: JN057_00352 ]
  • pan locus tag?: PNEUPAN001093000
  • symbol: JN057_RS01695
  • pan gene symbol?: celR
  • synonym:
  • product: BglG family transcription antiterminator

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: JN057_RS01695 [old locus tag: JN057_00352 ]
  • symbol: JN057_RS01695
  • product: BglG family transcription antiterminator
  • replicon: chromosome
  • strand: +
  • coordinates: 303465..305027
  • length: 1563
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NZ_CP071871 (303465..305027) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_0280 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTTATCAGAGTATAATTTGTCCATTGAGAGTAGGGCGAATAAAGGAGTTTATGTCTCA
    GGCGAGGAACGTGATAAACGACGTTTTATCATAAATTATTTCCTAGAGAATCAATTTTTT
    AAAACAATACATTGCTATGTAAAATTTAACTTTTTTGATCAAACTGTTCCATTAGAAGAA
    TTTGCTAGAATTGTTTTGGATGAATGCCAAGAGGCCAACCTAAAACTATCTGATTTTGTA
    CTACAGAATTTAGTAGTTCACATAGCATTGTCTGTGATTCGTTTAAAATCCGGATTTGAA
    ATAAAAAATATAGACTGTCAGATGACTGATGATGCAATAGAGAGAAAGGTTGCCCAAAGA
    ATTCTTTCTAAAGTAAGAGAAGTAACAAATCAGGAATTTCCAGTTCAGGAAATAGACTAC
    ATTACTTTGCATTTGTTAGCTAAGAGTCAACAATGTCAAAAAAATCAGAAGAATATTTCT
    GAAGAAGTTTTAAAAAAATCTTTATTTAAAACATTTCAGAATTTAGGATTAGATGATATG
    TATAACTTTTCTTCAGATTTCCAACTAATTGAAGGATTGATAACTCATCTAATGACACTA
    CAAGTACGTTTAGAAAGCCGGATTACCTTAAATAACCCTTTGGTAGATGAAATTAAACAG
    AATTATAGTGATATATTCTTTATGACTAGAGAAATTCTTGCAAATATGGACAAGTTCTTG
    GAGTGGACAATATCAGATGATGAAGTAGCATATGTAAGTCTTCACTTTTTAGCTGCTATG
    GAACGTAGCAAAGAGAGTACTAAGTTTAATATTCTTGCTATTTGTGCAACAGGATTTGGT
    GCAGCCCAAATGTTAAGAAATCGTTTGGAAACGGAGTTTGGGAAGCGAGTAGAAGTTGTT
    GATGTAATAGGCTATTATGAATTGAATCAAGAAAAACTTAAAGGAATAGATTTTATAGTG
    TCAGCTGTTGATTTATCAAATCTATATTTTCAAATCCCAGTTTTTAAAGTTAGTGTGTTT
    CTTAAAAGTGATGAGATGGAAATGATTAGAAAAGCTATGGATCAGATGCAAGTTTCTAGT
    TATGTACAATCATCAAAGATTAACAAATTTGAAAACAACGGCTTTAGACAGTATTTTAGT
    AAAGAAAACTTTTTAATATGTACTGAATCAGACAAGGTAAATTTACTTGAAAAGATGGTT
    GAGAGTTTATCTGTTGGTGAATCAAATGAGTTTGAACAATCTTTACTTTATGGAATTAAA
    CAGCGCGAAGAATTAAGTTCAGTTGTTTTTTCTGAAAAAATTGCAGTTCCGCATCCTATT
    CAGCCCTTTGGTACAGAGGGAAAGGTTTCGGTTGCAATTTGTAAAGATTCGTTACTCTGG
    GATAATCAAAGTTCACATGTCCAGCTAGTATTTCTTCTATCTCCATCAATATATGGGAAC
    GAAGGTTTGGCAACTGTGACTAAAAAGATAGTCTCTCTGACAGAGAATGATGAATTGCAA
    AATCAGCTAATATCTTGCAATAACTTTGAAGATTTTATTAACATATTTGAGAAGATAAAA
    TAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1563

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: JN057_RS01695 [old locus tag: JN057_00352 ]
  • symbol: JN057_RS01695
  • description: BglG family transcription antiterminator
  • length: 520
  • theoretical pI: 4.8385
  • theoretical MW: 60147.5
  • GRAVY: -0.166923

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, fructose subfamily, IIA component (TIGR00848; EC 2.7.1.69; HMM-score: 36.2)
    Signal transduction Signal transduction PTS PTS system, fructose subfamily, IIA component (TIGR00848; EC 2.7.1.69; HMM-score: 36.2)
    and 1 more
    Signal transduction Signal transduction PTS PTS IIA-like nitrogen-regulatory protein PtsN (TIGR01419; HMM-score: 15.5)
  • TheSEED: data available for D39, TIGR4
  • PFAM:
    PRD (CL0166) PRD; PRD domain (PF00874; HMM-score: 126.9)
    and 7 more
    PTase-anion_tr (CL0340) PTS_EIIA_2; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 (PF00359; HMM-score: 50.8)
    Phosphatase (CL0031) PTS_IIB; PTS system, Lactose/Cellobiose specific IIB subunit (PF02302; HMM-score: 26.2)
    MBB (CL0193) Omp85_2; OMP85 superfamily (PF19143; HMM-score: 16.9)
    PH (CL0266) DM10_dom; DM10 domain (PF06565; HMM-score: 13.3)
    no clan defined TTRAP; Putative transposon-transfer assisting protein (PF14203; HMM-score: 13.1)
    Beta-tent (CL0080) Mss4; Mss4 protein (PF04421; HMM-score: 12.7)
    no clan defined Nas2_N; Nas2 N_terminal domain (PF18265; HMM-score: 12.5)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • genes regulated by CelR*, TF important in Cellobiose utilization: in TIGR4

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.009311
    • TAT(Tat/SPI): 0.0005
    • LIPO(Sec/SPII): 0.002227
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_192044868 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MLSEYNLSIESRANKGVYVSGEERDKRRFIINYFLENQFFKTIHCYVKFNFFDQTVPLEEFARIVLDECQEANLKLSDFVLQNLVVHIALSVIRLKSGFEIKNIDCQMTDDAIERKVAQRILSKVREVTNQEFPVQEIDYITLHLLAKSQQCQKNQKNISEEVLKKSLFKTFQNLGLDDMYNFSSDFQLIEGLITHLMTLQVRLESRITLNNPLVDEIKQNYSDIFFMTREILANMDKFLEWTISDDEVAYVSLHFLAAMERSKESTKFNILAICATGFGAAQMLRNRLETEFGKRVEVVDVIGYYELNQEKLKGIDFIVSAVDLSNLYFQIPVFKVSVFLKSDEMEMIRKAMDQMQVSSYVQSSKINKFENNGFRQYFSKENFLICTESDKVNLLEKMVESLSVGESNEFEQSLLYGIKQREELSSVVFSEKIAVPHPIQPFGTEGKVSVAICKDSLLWDNQSSHVQLVFLLSPSIYGNEGLATVTKKIVSLTENDELQNQLISCNNFEDFINIFEKIK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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