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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 17-DEC-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae MDRSPN001
- locus tag: MDRSPN_RS05145 [old locus tag: MDRSPN_00983 ]
- pan locus tag?: PNEUPAN002294000
- symbol: iga
- pan gene symbol?: zmpA
- synonym:
- product: immunoglobulin A1 protease
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: MDRSPN_RS05145 [old locus tag: MDRSPN_00983 ]
- symbol: iga
- product: immunoglobulin A1 protease
- replicon: chromosome
- strand: +
- coordinates: 996183..1002197
- length: 6015
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NZ_AP018391 (996183..1002197) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1018 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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6001ATGGAAAAGTATTTTGGTGAAAAACAAGAGCGTTTTTCATTTAGAAAATTATCAGTAGGA
CTTGTATCTGCAACGATTTCAAGTTTATTTTTTATGTCTGTATTAGCTAGTTCATCTGTG
GATGCTCAAGAAACTGCGGGAGTTCACTATAAATATGTGGCAGATTCAGAGCTATCATCA
GAAGAAAAGAAGCAGCTTGTCTATGATATTCCGACATACGTGGAGAATGATGATGAAACT
TATTATCTTGTTTATAAGTTAAATTCTCAAAATCAACTGGTGGAATTACCAAATACTGGA
AGCAAGAATGAGAGGCAAGCCCTAGTTGCTGGTGCTAGCTTAGCTGCTCTGGGAATTTTA
ATTTTTGCTGTTTCCAAGAAAAAGGTTAAGAATAAAACGGTATTACATTTAGTATTGGTT
GCGGGAATGGGAAATGGTGTCTTAGTTTCAGTCCATGCTTTAGAAAATCATCTTTTGCTA
AATTACAATACGGACTATGAATTGACCTCTGGAGAAAAATTACCTCTTCCTAAAGAGATT
TCAGGTTACACTTATATTGGATATATCAAAGAGGGAAAAACGACTTCTGATTTTGAAGTA
AGTAATCAAGAAAAATCAGCAGCCACTCCTACAAAACAACAAAAGGTGGATTATAATGTT
ACACCAAATTTTGTAGACCATCCATCAACAGTACAAGCTATTCAGGAACAAACACCTGTT
TCTTCAACTAAGCCGACAGAAGTTCAAGTAGTTGAAAAACCTTTCTCTACTAAATTAATC
AATCCAAGAAAAGAAGAGAAACAATCTTCAGATTCTCAAGAACAATTAGCCGAACATAAG
AATCTAGAAACGAAGAAAGAGGAGAAGATTTCTCCAAAGGAAAAGACTGGGGTAAATACA
TTAAATCCACAGGATGAAGTTTTATCAGGTCAATTGAACAAACCTGAACTCTTATATCGT
GAGGAAACTATAGAGACAAAAATAGATTTTCAAGAAGAAATTCAAGAAAATCCTGATTTA
GCTGAAGGAACTGTAAGAGTAAAACAAGAAGGTAAATTAGGTAAGAAAGTTGAAATCGTC
AGAATATTCTCTGTAAACAAGGAAGAAGTTTCGCGAGAAATTGTTTCAACTTCAACGACT
GCGCCTAGTCCAAGAATAGTCGAAAAAGGTACTAAAAAAACTCAAGTTATAAAGGAACAA
CCTGAGACTGGTGTAGAACATAAGGACGTACAGTCTGGAGCTATTGTTGAACCCGCAATT
CAGCCTGAGTTGCCCGAAGCTGTAGTAAGTGATAAAGGCGAACCAGAAGTTCAACCGACA
TTACCCGAAGCAGTTGTGACCGACAAAGGTGAGACTGAGGTTCAACCAGAGTCGCCAGAT
ACTGTGGTAAGTGATAAAGGTGAACCAGAGCAGGTAGCCCCATTGCCAGAATATAAGGGT
AATATTGAGCAAGTAAAACCTGAAACTCCGGTTGAGAAGACCAAAGAACAAGGTCCAGAA
AAAACTGAAGAAGTTCCAGTAAAACCAACAGAAGAAACACCAGTAAATCCAAATGAAGGT
ACTACAGAAGGAACCTCAATTCAAGAAGCAGAAAATCCAGTTCAACCTGCAGAAGAATCA
ACAACGAATTCAGAGAAAGTATCACCAGATACATCTAGCGAAAATACTGGGGAAGTGTCC
AGTAATCCTAGTGATTCGACAACCTCAGTTGGAGAATCAAATAAACCAGAACATAATGAC
TCTAAAAATGAAAATTCAGAAAAAACTGTAGAAGAAGTTCCAGTAAATCCAAATGAAGGC
ACAGTAGAAGGTACCTCAAATCAAGAAACAGAAAAACCAGTTCAACCTGCAGAAGAAACA
CAAACAAACTCTGGGAAAATAGCTAACGAAAATACTGGAGAAGTATCCAATAAACCTAGT
GATTCAAAACCACCAGTTGAAGAATCAAATCAACCAGAAAAAAACGGAACTGCAACAAAA
CCAGAAAATTCAGGTAATACAACATCAGAGAATGGACAAACAGAACCAGAACCATCAAAC
GGAAATTCAACTGAGGATGTTTCAACCGAATCAAACACATCCAATTCAAATGGAAACGAA
GAAATTAAACAAGAAAATGAACTAGACCCTGATAAAAAGGTAGAAGAACCAGAGAAAAAA
CTCGAATTAAGAAATGTTTCTGATATTGAGTTGTATAGTCAGACGAATGGAACCTACAGA
CAACATGTTTCATTGGATGGAATTCCAGAGAATACGGATACTTACTTTGTCAAGGTAAAA
TCTTCAGCATTTAAAGATGTCTATATACCAGTAGCTTCAATAACTGAAGAGAAAAGAAAT
GGGCAGTCAGTTTATAAAATCACAGCCAAAGCTGAGAAACTCCAGCAAGAACTAGAAAAT
AAATATGTCGACAATTTCACCTTCTACCTCGATAAGAAGGCTAAAGAGGAAAATACAAAC
TTTACTTCCTTTAGCAACCTGGTCAAAGCTATAAACCAAAATCCCTCTGGAACCTATCAT
TTAGCGGCCAGCCTGAATGCTAACGAAGTGGAGCTTGGTCCTGATGAAAGATCCTATATC
AAGGACACCTTTACTGGTCGTTTAATCGGTGAAAAAGATGGCAAGAATTATGCTATCTAT
AATTTGAAAAAACCTCTGTTTGAAAACTTGAGTGGTGCTACAGTAGAAAAACTGAGTCTA
AAAAATGTTGCTATTTCAGGGAAAGATGATATCGGTTCACTGGCAAATGAAGCTCAGAAT
AATACAAAAATTAAGCAAGTTCACGTCGATGGTGTTCTGGCTGGTGAACGTGGTATCGGT
GGTTTGCTGGCTAAGGCTGAGCAATCAAGCATCACAGAGAGCAGTTTCAAGGGAAGAATT
ATCAACACTTATGAAACGACTGCTGCCTACAATATCGGTGGTATGGTCGGTCATTTGACA
GGTGACAAGGCTTTACTTACTAAGTCAAAAGCGACAGTAGCCATTTCATCTAACACAAAT
ACTTCAGATCAGACTGTGGGTGGACTTGCAGGCCTAGTAGACCGAGATGCACAGATCCAA
GATAGCTATGCTGAAGGTGATATCAACAATGTCAAGCACTTTGGTAGAGTCGCTGGAGTG
GCAGGCAATTTGTGGGATCGAACTTCTGGTGATGTTAGGTATGCTGGAAGTTTGACCAAT
GTTCTCAGCGATGTTAATGTAACCAACGGAAATGCCATCACTGGTTACCACTATAACGAA
ATGAAGGTAAAGGACACATTCAGCAGCAAGGCCAACAGAGTCTACAATGTCACCTTGGTC
AAGGATGAGGTCGTCAGCAAGGAATCCTTTGAAGAAAGAGGAACAATGCTAGATGCTTCT
CAAATTGCAAGCAAAAAAGCAGAAATCAATCCTTTCATTCTACCAACAGTGGAGCCACTT
TCAACAAGTGGCAAAAAAGACAGTGATTTTTCTAAGGTGGCCTATTATCAAGCTAAGCGC
AACTTGACTTATAAAAACATTGAAAAATTGCTACCTTTCTACAACAAGGCAACCATCGTC
AAATACGGAAACCTGGTCAATGAGAACAGTCTTTTATATCAAAAAGAACTCTTGTCAGCA
GTCATGATGAAGGACAACCAAGTCATCACAGACATTGTTTCTAACAAACAGACTGCAAAC
AAACTCTTGCTTCACTACAAGGATGATTTATCTGAGAAGCTGGATCTCAAATACCAGAAT
GATTTCGCCAAATTAGCAGAATATAGTCTGGGCAATACTGGACTTCTCTATACGCCAAAC
CAATTCCTGTATGACCAAACCTCTATCATCAAGCAAGTCTTACCTGACTTACAAAAGGTT
GACTATCATTCAGAAGCCATCAGAAAGACGCTGGGTATTTCTCCAAACGTCAAGCAAACT
GAGCTCTATCTAGAAGACCAGTTCGCCAAAACAAAACAACAACTGGAAGACAGTTTGAAA
AAACTCTTGTCAGCGGATGCTGGACTGGCTAGTGCTAACCCAGTCACTGAAGGTTATCTT
GTAGATAAAATCAAACGCAACAAGGAAGCCTTGCTACTTGGCTTGACCTATCTGGAACGG
TGGTATAACTTTAGCTATGGTCAGGTGAATGTCAAAGACCTAGTTCTGTACCATTTGGAC
TTCTTTGGTAAGGGGAATGCTTCACCATTAGATACTCTGATTGAGTTGGGTAAATCTGGC
TTTAACAATCTTCTAGCTAAGAATAATGTCGATACTTATGGTATCAGTCTTGCCAGTCAA
CATGGAACGACAGATTTGTTTAGCACGCTGGAACATTACCGAAAAGTCTTTTTACCAAAT
ACAAGCAATAATGACTGGTTTAAATCAGAGACTAAGGCTTACATTGTCGAAGAAAAATCC
ACTATTGCAGAGGTCAAAGCCAAGCAAAAGCAAGCAGGAACTAAGTACTCTATCGGTGTT
TATGACCGAATTACTAGTAATACTTGGAAATACCGCAATATGGTCTTGCCTCTCCTGACC
TTGCCAGAGAGATCCGTATTTGTCATCTCGACCATGTCTAGTCTAGGATTTGGAGCTTAT
GATCGCTACCGCAGTAGTGACCATAAAGCGGGCAAGGCTCTCAATGATTTTGTTGAAGAA
AATGCGCGTGAAACAGCCAAACGTCAGCGAGATCACTACGATTATTGGTATCGTATTTTA
GATGAACAGTCACGCGAAAAACTCTATCGTACGATTCTCCTTTATGATGCCTATAAGTTT
GGGGATGATACAACATCAGGAAAAGCTACAGCGGAGGCTAAGTTTGATAGCTCCAATCCA
GCTATGAAGAACTTCTTTGGACCAGTTGGCAATAAGGTAGTACACAACCAGCATGGAGCC
TACGCTACAGGGGACGGCGTCTACTATATGTCTTACCGCATGCTGGACAAGGATGGAGCC
ATTACTTATACCCATGAAATGACCCATGATTCGGATCAGGATATTTACCTTGGTGGCTAT
GGTCGAAGAAGTGGCTTGGGACCAGAGTTCTTCGCAAAAGGCTTATTGCAAGCCCCTGAC
CAACCAAGTGACGCAACCATTACCATCAATTCTATCTTGAAACACTCAAAATCAGATAGT
ACAGAGGGATCCCGTCTTCAAGTCTTGGATCCGACAGAGAGATTCCAAAACGCAGCAGAT
CTTCAGAACTATGTCCATAACATGTTTGACCTTATCTACATGATGGAATATCTCGAAGGG
CAGTCAATCGTTAATAAACTAAGTGTTTACCAGAAAATAGAAGCTCTCAGAAAAATCGAG
AACCAATATCTAACAGATCCTGCTGATGGAAATGATGTTTATGCTACTAATGTTGTGAAA
AATTTGACTGAAGATGAAGCTAAAAAATTGACGAGCTTTGATAGTTTGATTGACAATAAC
ATTCTTTCGGCTCGTGAGTATAAGGCTGGCACTTATGAGAGAAATGGCTACTTTACTATA
AAACTCTTTGCACCAATCTTTTCAGCATTGAGCGGTGAGAAAGGAACTCCAGGTGACCTT
ATGGGACGAAGGATAGCTTTTGAACTTCTAGCTGCTAAAGGATTTAAAGATGGTATGGTA
CCATATATTTCCAACCAATACGAAGAAGATGCTAAACAACAAGGGCAAACTATCAATCTT
TATGGTAAAGAACGGGGCTTGGTGACCGATGAGCTTGTTTTGAAAAAGGTATTTGATGGT
AAGTATAAAACTTGGGCAGAATTTAAGACAGCTATGTACCAAGAACGGGTGGATCAGTTT
GGAAACTTGAAGCAGGTGACCTTTAAAGATCCGACAAAACCATGGCCAAGATATGGCACA
AAGACTATCAATAATGTGGATGAATTGCAGAAACTAATGGATGAAGCTGTTTTGCAGGAT
GCTACAGGTACACGTTGGAGTAATTATAATCCAGAAACGGACAGTGCCGTCCATAAGTTG
AAGAGAGCAATCTTTAAAGCCTATCTTGACCAAACAAATGATTTTAGAAGTTCAATTTTT
GAGAATAAAAAATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: MDRSPN_RS05145 [old locus tag: MDRSPN_00983 ]
- symbol: Iga
- description: immunoglobulin A1 protease
- length: 2004
- theoretical pI: 4.94021
- theoretical MW: 223275
- GRAVY: -0.699152
⊟Function[edit | edit source]
- TIGRFAM: gram-positive signal peptide, YSIRK family (TIGR01168; HMM-score: 43.2)and 1 moreCell envelope Other LPXTG cell wall anchor domain (TIGR01167; HMM-score: 21.7)
- TheSEED: data available for Hungary19A-6
- PFAM: no clan defined Peptidase_M26_C; M26 IgA1-specific Metallo-endopeptidase C-terminal region (PF07580; HMM-score: 1100.3)and 5 morePeptidase_M26_N; M26 IgA1-specific Metallo-endopeptidase N-terminal region (PF05342; HMM-score: 280.3)G5 (CL0593) G5; G5 domain (PF07501; HMM-score: 55.1)no clan defined Glug; The GLUG motif (PF07581; HMM-score: 36.7)YSIRK_signal; YSIRK type signal peptide (PF04650; HMM-score: 36)Gram_pos_anchor; LPXTG cell wall anchor motif (PF00746; HMM-score: 28.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cellwall
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 10
- Extracellular Score: 0
- Internal Helices: 2
- DeepLocPro: Cell wall & surface
- Cytoplasmic Score: 0.0001
- Cytoplasmic Membrane Score: 0.004
- Cell wall & surface Score: 0.8558
- Extracellular Score: 0.14
- SignalP: Signal peptide SP(Sec/SPI) length 42 aa
- SP(Sec/SPI): 0.91723
- TAT(Tat/SPI): 0.067255
- LIPO(Sec/SPII): 0.005174
- Cleavage Site: CS pos: 42-43. VDA-QE. Pr: 0.9143
- predicted transmembrane helices (TMHMM): 3
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000417189 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MEKYFGEKQERFSFRKLSVGLVSATISSLFFMSVLASSSVDAQETAGVHYKYVADSELSSEEKKQLVYDIPTYVENDDETYYLVYKLNSQNQLVELPNTGSKNERQALVAGASLAALGILIFAVSKKKVKNKTVLHLVLVAGMGNGVLVSVHALENHLLLNYNTDYELTSGEKLPLPKEISGYTYIGYIKEGKTTSDFEVSNQEKSAATPTKQQKVDYNVTPNFVDHPSTVQAIQEQTPVSSTKPTEVQVVEKPFSTKLINPRKEEKQSSDSQEQLAEHKNLETKKEEKISPKEKTGVNTLNPQDEVLSGQLNKPELLYREETIETKIDFQEEIQENPDLAEGTVRVKQEGKLGKKVEIVRIFSVNKEEVSREIVSTSTTAPSPRIVEKGTKKTQVIKEQPETGVEHKDVQSGAIVEPAIQPELPEAVVSDKGEPEVQPTLPEAVVTDKGETEVQPESPDTVVSDKGEPEQVAPLPEYKGNIEQVKPETPVEKTKEQGPEKTEEVPVKPTEETPVNPNEGTTEGTSIQEAENPVQPAEESTTNSEKVSPDTSSENTGEVSSNPSDSTTSVGESNKPEHNDSKNENSEKTVEEVPVNPNEGTVEGTSNQETEKPVQPAEETQTNSGKIANENTGEVSNKPSDSKPPVEESNQPEKNGTATKPENSGNTTSENGQTEPEPSNGNSTEDVSTESNTSNSNGNEEIKQENELDPDKKVEEPEKKLELRNVSDIELYSQTNGTYRQHVSLDGIPENTDTYFVKVKSSAFKDVYIPVASITEEKRNGQSVYKITAKAEKLQQELENKYVDNFTFYLDKKAKEENTNFTSFSNLVKAINQNPSGTYHLAASLNANEVELGPDERSYIKDTFTGRLIGEKDGKNYAIYNLKKPLFENLSGATVEKLSLKNVAISGKDDIGSLANEAQNNTKIKQVHVDGVLAGERGIGGLLAKAEQSSITESSFKGRIINTYETTAAYNIGGMVGHLTGDKALLTKSKATVAISSNTNTSDQTVGGLAGLVDRDAQIQDSYAEGDINNVKHFGRVAGVAGNLWDRTSGDVRYAGSLTNVLSDVNVTNGNAITGYHYNEMKVKDTFSSKANRVYNVTLVKDEVVSKESFEERGTMLDASQIASKKAEINPFILPTVEPLSTSGKKDSDFSKVAYYQAKRNLTYKNIEKLLPFYNKATIVKYGNLVNENSLLYQKELLSAVMMKDNQVITDIVSNKQTANKLLLHYKDDLSEKLDLKYQNDFAKLAEYSLGNTGLLYTPNQFLYDQTSIIKQVLPDLQKVDYHSEAIRKTLGISPNVKQTELYLEDQFAKTKQQLEDSLKKLLSADAGLASANPVTEGYLVDKIKRNKEALLLGLTYLERWYNFSYGQVNVKDLVLYHLDFFGKGNASPLDTLIELGKSGFNNLLAKNNVDTYGISLASQHGTTDLFSTLEHYRKVFLPNTSNNDWFKSETKAYIVEEKSTIAEVKAKQKQAGTKYSIGVYDRITSNTWKYRNMVLPLLTLPERSVFVISTMSSLGFGAYDRYRSSDHKAGKALNDFVEENARETAKRQRDHYDYWYRILDEQSREKLYRTILLYDAYKFGDDTTSGKATAEAKFDSSNPAMKNFFGPVGNKVVHNQHGAYATGDGVYYMSYRMLDKDGAITYTHEMTHDSDQDIYLGGYGRRSGLGPEFFAKGLLQAPDQPSDATITINSILKHSKSDSTEGSRLQVLDPTERFQNAADLQNYVHNMFDLIYMMEYLEGQSIVNKLSVYQKIEALRKIENQYLTDPADGNDVYATNVVKNLTEDEAKKLTSFDSLIDNNILSAREYKAGTYERNGYFTIKLFAPIFSALSGEKGTPGDLMGRRIAFELLAAKGFKDGMVPYISNQYEEDAKQQGQTINLYGKERGLVTDELVLKKVFDGKYKTWAEFKTAMYQERVDQFGNLKQVTFKDPTKPWPRYGTKTINNVDELQKLMDEAVLQDATGTRWSNYNPETDSAVHKLKRAIFKAYLDQTNDFRSSIFENKK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1018 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]