PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003555000
• symbol^?: recA
• synonym:
• description^?: recombinase RecA

  descriptions from strain specific annotations:

  • recombinase RecA
  • protein RecA
  • RecA recombinase (recombinase A)
  • recA protein
  • DNA recombination/repair protein RecA
  • DNA recombination/repair
  • RecA/RadA recombinase
  • recombinase A
  • recombination protein A
• strand^?: -
• coordinates^?: 4663879..4665045
• occurrence^?: in 100% of 43 strains

⊟Orthologs

TIGR4:
SP_RS09750 (recA)
D39:
SPD_RS09265 (recA)
D39V:
SPV_RS09260 (recA)
Hungary19A-6:
SPH_RS10215 (recA)
EF3030:
EF3030_RS09450 (recA)
670-6B:
SP670_RS10200 (recA)
6A-10:
HKM25_RS09765 (recA)
70585:
SP70585_RS10030 (recA)
A026:
T308_RS09185 (recA)
A66:
A66_RS08755 (recA)
AP200:
SPAP_RS09700 (recA)
ASP0581:
EL334_RS09960 (recA)
ATCC 49619:
EL263_RS09525 (recA)
ATCC 700669:
SPN23F_RS10005 (recA)
BM6001:
ODS73_RS10115 (recA)
BVJ1JL:
JN057_RS09465 (recA)
CGSP14:
SPCG_RS10030 (recA)
G54:
SPG_RS09255 (recA)
gamPNI0373:
HMPREF1038_RS09465 (recA)
HU-OH:
EL271_RS09575 (recA)
Hu15:
SPNHU15_RS09270 (recA)
Hu17:
SPNHU17_RS09260 (recA)
INV104:
INV104_RS09695 (recA)
INV200:
SPNINV200_RS09440 (recA)
JJA:
SPJ_RS09590 (recA)
MDRSPN001:
MDRSPN_RS08990 (recA)
NCTC7465:
AT689_RS04295 (recA)
NCTC7466:
DQM66_RS09260 (recA)
NU83127:
EL277_RS09935 (recA)
OXC141:
SPNOXC_RS09370 (recA)
P1031:
SPP_RS09705 (recA)
R6:
SPR_RS08825 (recA)
SP49:
BMJ42_RS10440 (recA)
SPN032672:
SPN032672_RS06150 (recA)
SPN034156:
SPN034156_RS04365 (recA)
SPN034183:
SPN034183_RS09390 (recA)
SPN994038:
SPN994038_RS09295 (recA)
SPN994039:
SPN994039_RS09300 (recA)
SPNA45:
SPNA45_RS01605 (recA)
ST556:
MYY_RS09630 (recA)
Taiwan19F-14:
SPT_RS09430 (recA)
TCH8431/19A:
HMPREF0837_RS10565 (recA)
Xen35:
CXP32_RS09870 (recA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLAL
  D39             MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLAL
  D39V            MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLAL
  Hungary19A-6    MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLAL
  EF3030          MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLAL
                  ************************************************************
  
  TIGR4           DIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAAL
  D39             DIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAAL
  D39V            DIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAAL
  Hungary19A-6    DIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAAL
  EF3030          DIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAAL
                  ************************************************************
  
  TIGR4           GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQ
  D39             GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQ
  D39V            GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQ
  Hungary19A-6    GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQ
  EF3030          GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQ
                  ************************************************************
  
  TIGR4           ARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
  D39             ARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
  D39V            ARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
  Hungary19A-6    ARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
  EF3030          ARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
                  ************************************************************
  
  TIGR4           NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDI
  D39             NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDI
  D39V            NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDI
  Hungary19A-6    NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDI
  EF3030          NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDI
                  ************************************************************
  
  TIGR4           IKKAGAWYSYKDEKIGQGSENAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENK
  D39             IKKAGAWYSYKDEKIGQGSENAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENK
  D39V            IKKAGAWYSYKDEKIGQGSENAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENK
  Hungary19A-6    IKKAGAWYSYKDEKIGQGSENAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENK
  EF3030          IKKAGAWYSYKDEKIGQGSENAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENK
                  ************************************************************
  
  TIGR4           KDEPKKEEAVNEEVPLDLGDELEIEIEE
  D39             KDEPKKEEAVNEEVPLDLGDELEIEIEE
  D39V            KDEPKKEEAVNEEVPLDLGDELEIEIEE
  Hungary19A-6    KDEPKKEEAVNEEVPLDLGDELEIEIEE
  EF3030          KDEPKKEEAVNEEVTLDLGDELEIEIEE
                  **************.*************