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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 07-FEB-2021

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae AP200
  • locus tag: SPAP_RS09700 [old locus tag: SPAP_1959 ]
  • pan locus tag?: PNEUPAN003521000
  • symbol: recA
  • pan gene symbol?: recA
  • synonym:
  • product: recombinase RecA

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPAP_RS09700 [old locus tag: SPAP_1959 ]
  • symbol: recA
  • product: recombinase RecA
  • replicon: chromosome
  • strand: -
  • coordinates: 1826771..1827937
  • length: 1167
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_014494 (1826771..1827937) NCBI
  • BioCyc: SPAP_RS09700 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_1739 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAA
    AAGGCCTTGAATGACGCTCTTAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATG
    CGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGAGCTCAGGTTCTTTAGCTCTT
    GACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
    GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGT
    GGGATTGCTGCCTTTATCGATGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTT
    GGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACTCAGGAGAGCAAGGTCTTGAG
    ATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
    GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAG
    GCTCGTATGATGAGCCAGGCCATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACA
    ATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAGTGATGTTTGGAAATCCAGAA
    ACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
    AATACACAAATTAAGGGAACTGGTGACCAAAAAGAAACCAATGTCGGTAAAGAAACTAAG
    ATTAAGGTTGTAAAAAATAAGGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATG
    TACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGATTGCAAGCGATTTGGATATT
    ATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
    AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTC
    CGTTCTAAATTTGGCTTGATTGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAA
    AAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAGTTACGCTTGACTTAGGCGAT
    GAACTTGAAATCGAAATTGAAGAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1167

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPAP_RS09700 [old locus tag: SPAP_1959 ]
  • symbol: RecA
  • description: recombinase RecA
  • length: 388
  • theoretical pI: 4.84048
  • theoretical MW: 41953.5
  • GRAVY: -0.386856

⊟Function[edit | edit source]

  • ⊞TIGRFAM:
    Genetic information processing DNA metabolism DNA replication, recombination, and repair protein RecA (TIGR02012; HMM-score: 534.8)
    and 7 more
    DNA repair and recombination protein RadB (TIGR02237; HMM-score: 54.4)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair DNA repair and recombination protein RadA (TIGR02236; HMM-score: 37.6)
    DNA repair protein RAD51 (TIGR02239; HMM-score: 34.8)
    meiotic recombinase Dmc1 (TIGR02238; HMM-score: 34.2)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair DNA repair protein RadA (TIGR00416; HMM-score: 23.8)
    KaiC domain protein, PAE1156 family (TIGR03881; HMM-score: 18.2)
    KaiC domain protein, AF_0351 family (TIGR03880; HMM-score: 15.2)
  • TheSEED: see SPAP_1959
  • ⊞PFAM:
    P-loop_NTPase (CL0023) RecA; recA bacterial DNA recombination protein (PF00154; HMM-score: 465.3)
    and 7 more
    Rad51; Rad51 (PF08423; HMM-score: 39.7)
    ATPase; KaiC (PF06745; HMM-score: 28.3)
    ATPase_2; ATPase domain predominantly from Archaea (PF01637; HMM-score: 20.6)
    AAA_24; AAA domain (PF13479; HMM-score: 18.7)
    AAA_16; AAA ATPase domain (PF13191; HMM-score: 17.4)
    AAA; ATPase family associated with various cellular activities (AAA) (PF00004; HMM-score: 15)
    AAA_25; AAA domain (PF13481; HMM-score: 14.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.023194
    • TAT(Tat/SPI): 0.006544
    • LIPO(Sec/SPII): 0.00085
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_001085463 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRGNTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSENAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVTLDLGDELEIEIEE

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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