Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 31-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae 70585
- locus tag: SP70585_2247 [new locus tag: SP70585_RS11165 ]
- pan locus tag?: PNEUPAN003684000
- symbol: SP70585_2247
- pan gene symbol?: —
- synonym:
- product: membrane protein, putative
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SP70585_2247 [new locus tag: SP70585_RS11165 ]
- symbol: SP70585_2247
- product: membrane protein, putative
- replicon: chromosome
- strand: -
- coordinates: 2056419..2057648
- length: 1230
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP000918 (2056419..2057648) NCBI
- BioCyc: see SP70585_RS11165
- MicrobesOnline: 7478163 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_1951 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201ATGAAACTATTGTTTAGAAATCCAGCTTATAGAATTTTGACTTTATCACGCTTCTTCAAT
GCTTTTGGTGCTTCGATTTTCAACCTGGTCTTTATCGTCTATGCATCGACCTTGTCACAA
GCATCTTTTGCTGTTGCTATGGCGAATATTGTCATGATTCTTCCGACCCTCTTTACAGTT
TTTGTAGGGATTCGGGCAGATTACACGAGGGACAAGGTCAAATGGATGGTCTATAGCGGT
TTGTTTCAGGCGGTTCTATTTTTTCTAGCAGCCCTAGTTGTTCAGCAAGCTAGTCTCTTT
GCCTTTTCTAGCCTGTGTTTGATCAATGTCATTAGTGATATCATCAGTGATTTTGCAGGT
GGCCTGCGCATGCCTCTTATTAAGGAAAAAGTAGCTGAAAATGATTTGATGGAGGCTTAT
TCTTTTTCCCAGTTTATCACCTATATTTCAGCTATTGGTGGTCAAGCTTTTGGAGTCTGG
CTCTTAGGTCTATCGGTCAACAATTTTTCCCTCGTTGCGGGAATCAATGCCTGTTTCTTC
CTAGTATCAGCCGTCATCCTCTTTTTAGGAAAAAGCAAATTGAGCCTGTCAATGTCATCT
GCTGATGGTGAAAAACTAAAAAATGAGAAGCTTTCTATCAAAGACCAGTTCCTAACAATT
TACCGAAATTTACGTCTCGTTTTTCTTAAAAGTGGACAGAAAAACTTTGGTTTTATGCTC
TTTGCTGTCTTGCTTATTAATTCCTTGGGTGGCGCTTTGGGTGGAATTTATAATATCTTC
TTTTTGAGCCATTCTCTCTTGAATTTTTCTTATACAGAGGCACTATTTATCAATCAATTC
TGTGTTTTAGTAGCAGTTATCATCAGTAGCCTTACGGGCAATGATTATTTTGGGAAGCAG
TCCTTGCCTAGATTGATGATGTGGGAGACCGTAGGACTTAGTCTAGTTGGTTTGGCTAAT
TTATTCAATCAAGTCGTGCTTGGTTTGCTATTTCTCTTCTTTACTCTGTATGTGTCTGGT
AAAGTTCAACCAAAGATTAGTGCCATGCTCATGAAAAATCTAGCTCCAGAGGTTCTAGCT
CGTACTAGTAATTTTTTCGGTCTATTGTTTACCTTATCCATACCTGTGGGAACAGCTTGT
TTTTCACTAGTAGCCGTATGGAACATGCAGTTGACTTGGATGCTATTTGTTGGTTTTTCC
TTGCTAGCTATTTTTTTTGACAATTCTTAA60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1080
1140
1200
1230
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SP70585_2247 [new locus tag: SP70585_RS11165 ]
- symbol: SP70585_2247
- description: membrane protein, putative
- length: 409
- theoretical pI: 9.80132
- theoretical MW: 45296.5
- GRAVY: 0.871394
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 10
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.054827
- TAT(Tat/SPI): 0.013117
- LIPO(Sec/SPII): 0.01459
- predicted transmembrane helices (TMHMM): 10
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKLLFRNPAYRILTLSRFFNAFGASIFNLVFIVYASTLSQASFAVAMANIVMILPTLFTVFVGIRADYTRDKVKWMVYSGLFQAVLFFLAALVVQQASLFAFSSLCLINVISDIISDFAGGLRMPLIKEKVAENDLMEAYSFSQFITYISAIGGQAFGVWLLGLSVNNFSLVAGINACFFLVSAVILFLGKSKLSLSMSSADGEKLKNEKLSIKDQFLTIYRNLRLVFLKSGQKNFGFMLFAVLLINSLGGALGGIYNIFFLSHSLLNFSYTEALFINQFCVLVAVIISSLTGNDYFGKQSLPRLMMWETVGLSLVGLANLFNQVVLGLLFLFFTLYVSGKVQPKISAMLMKNLAPEVLARTSNFFGLLFTLSIPVGTACFSLVAVWNMQLTWMLFVGFSLLAIFFDNS
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: Rgg (activation) regulon
Rgg (TF) important in Cell wall metabolism; RegPrecise
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1951 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.