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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 17-JAN-2018

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae AP200
  • locus tag: SPAP_0417 [new locus tag: SPAP_RS02055 ]
  • pan locus tag?: PNEUPAN001232000
  • symbol: SPAP_0417
  • pan gene symbol?: cbpG
  • synonym:
  • product: V8-like Glu-specific endopeptidase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPAP_0417 [new locus tag: SPAP_RS02055 ]
  • symbol: SPAP_0417
  • product: V8-like Glu-specific endopeptidase
  • replicon: chromosome
  • strand: +
  • coordinates: 386672..387586
  • length: 915
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAAGAAAACTATTTATAAAAAATTGGGTATTTCAATTATTGCGAGTACTTTATTGGCT
    AGCCAGTTATCGACAGTATCTGCTTTGAGTGTTATTTCTAGTACAGGTGAAGAATATGAG
    GTAAGTGAGACATTACAAGATAGTCCAGGAACTAATAATTTTTCACTTCCCAATGTTTCA
    CCGACTTATGGTCAATATTATACAAATCAGTCAGAAGTCATTATTGGTAAAAATGATTTA
    GTTAAGGTAAAAAATACTTTACAATATCCTTATTCTACATCAGCTTATGTAGAGTCAGAA
    TTTCGTGGTGTGAAAAATGGTAAAGATGTAACTTATCGAGGGAGTGCCAATTTTATAAAG
    GATAATGTCCTTATTACTGCTGCTCATAATATTTATAAACATGAGTTTGGTAAAGATGCA
    GAAGAACTATATGTTACTCCTGCTCGTACTCCAAATAGTGTGCCGTTTGGTCGGATAAAA
    GTAAAAGAAGTTCGTTATTTGAAGGAATTTAGAAATTTAAATTCTAAGGATGCAAGGGAA
    TATGACTTGGCTTTATTAATTCTAGAAGAGCCCATTGGTGCAAAATTAGGGACTTTGGGT
    CTTCCTACTAGTCAAAAAAATTTGACAGGAATAACTGTGACTATCACAGGCTATCCATCA
    TATAATTTTAAAATTCATCAAATGTATACAGATAAAAAACAAGTTTTAAGTGATGATGGC
    ATGTTCTTGGACTACCAAGTTGATACTTTAGAGGGGTCTAGTGGATCTACAGTTTATGAT
    GCTAGTAACCGCGTAGTAGGAGTGCATACTTTAGGAGATGGAGCTAATCAAATTAACAGT
    GCAGTTAAATTAAATGAACGAAATTTGCCATTTATTTATTCGGTTCTTAAAGGTTACTCT
    CTTGAAGGATGGTGA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    915

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPAP_0417 [new locus tag: SPAP_RS02055 ]
  • symbol: SPAP_0417
  • description: V8-like Glu-specific endopeptidase
  • length: 304
  • theoretical pI: 7.73536
  • theoretical MW: 33682.7
  • GRAVY: -0.341447

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED  :
    • FIG01119860: hypothetical protein
  • PFAM:
    Peptidase_PA (CL0124) Trypsin; Trypsin (PF00089; HMM-score: 36.7)
    Trypsin_2; Trypsin-like peptidase domain (PF13365; HMM-score: 34.7)
    and 2 more
    Peptidase_S39; Peptidase S39 (PF02122; HMM-score: 19.3)
    no clan defined Doppel; Prion-like protein Doppel (PF11466; HMM-score: 11)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.03
    • Cytoplasmic Membrane Score: 8.77
    • Cellwall Score: 0.22
    • Extracellular Score: 0.97
    • Internal Helix: 1
  • DeepLocPro: Extracellular
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.0002
    • Cell wall & surface Score: 0.0019
    • Extracellular Score: 0.9979
  • SignalP: Signal peptide SP(Sec/SPI) length 28 aa
    • SP(Sec/SPI): 0.981756
    • TAT(Tat/SPI): 0.002992
    • LIPO(Sec/SPII): 0.01349
    • Cleavage Site: CS pos: 28-29. VSA-LS. Pr: 0.5872
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: ADM84010 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MKKTIYKKLGISIIASTLLASQLSTVSALSVISSTGEEYEVSETLQDSPGTNNFSLPNVSPTYGQYYTNQSEVIIGKNDLVKVKNTLQYPYSTSAYVESEFRGVKNGKDVTYRGSANFIKDNVLITAAHNIYKHEFGKDAEELYVTPARTPNSVPFGRIKVKEVRYLKEFRNLNSKDAREYDLALLILEEPIGAKLGTLGLPTSQKNLTGITVTITGYPSYNFKIHQMYTDKKQVLSDDGMFLDYQVDTLEGSSGSTVYDASNRVVGVHTLGDGANQINSAVKLNERNLPFIYSVLKGYSLEGW

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

B Mann, C Orihuela, J Antikainen, G Gao, J Sublett, T K Korhonen, E Tuomanen
Multifunctional role of choline binding protein G in pneumococcal pathogenesis.
Infect Immun: 2006, 74(2);821-9
[PubMed:16428724] [WorldCat.org] [DOI] (P p)

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