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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 20-DEC-2020

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae OXC141
  • locus tag: SPNOXC_RS01970 [old locus tags: SPNOXC03630 SPNOXC_03630 ]
  • pan locus tag?: PNEUPAN001225000
  • symbol: SPNOXC_RS01970
  • pan gene symbol?: aliA
  • synonym:
  • product: peptide ABC transporter ATP-binding protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS, pseudogene
  • locus tag: SPNOXC_RS01970 [old locus tags: SPNOXC03630 SPNOXC_03630 ]
  • symbol: SPNOXC_RS01970
  • product: peptide ABC transporter ATP-binding protein
  • replicon: chromosome
  • strand: +
  • coordinates: <355320..356408
  • length: 1089
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_017592 <355320..356408 NCBI
  • BioCyc: SPNOXC_RS01970 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_0334 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    CAAGACTCTATTACGTATCTAGTTGGTACAAATATTGACCGTCAGTCCTATAAATATACA
    TCTAAGACCAGTGAAGAACAAAAAACATCTACGAAAAAGGCTCTCTTAAACAAGGATTTC
    CGTCAGGCTATTGCATTTGGATTTGACCGTACAGCCTATGCCTCTCAGTTGAATGGACAA
    ACTGGAGCAAGCAAAATCTTACGTAATCTCTTTGTTCCACCAACATTTGTTCAAGCAGAT
    GGTAAAAACTTTGGCGATATGGTCAAAGAGAAATTGGTCACTTATGGGGATGAATGGAAG
    GATGTTAATCTTGCAGATTCTCAGGATGGTCTTTACAATCCAGAAAAAGCCAAGGCTGAA
    TTTGCTAAAGCTAAATTAGCCTTACAAGCAGAAGGAGTCCAATTCCCAATTCATTTAGAT
    ATGCCAGTTGACCAGACAGCAACTACAAAAGTTCAGCGCGTCCAATCTATGAAACAATCC
    TTGGAAGCAACTTTAGGAACTGATAATGTCATTATTGATATCCAACAACTACAAAAAGAC
    GAAGTAAACGATATTACATATTTTGCTGAAAACGCTGCTGGCGAAGACTGGGATTTATCA
    GATAATGTCGGTTGGGGTCCAGACTTTGCCGATCCATCAACCTACCTTGATATCATCAAA
    CCATCTGTAGGAGAAAGTACTAAAACATATTTAGGGTTTGACTCAGGGGAAGATAATGTA
    GCTGCTAAAAAAGTAGGTCTATATGACTACGAAAAATTGGTTACTGAGGCTGGTGATGAG
    GCTACAGATGTTGCTAAACGCTATGATAAATACGCTGCAGCCCAAGCTTGGTTGACAGAT
    AGTGCTTTGATTATTCCAACTACATCTCGTACAGGGCGTCCAATCTTGTCTAAGATGGTA
    CCATTTACAATACCATTTGCATTGTCAGGAAATAAAGGTACAAGTGAACCAATCTTATAT
    AAATACTTGGAACTTCAAGACAAGGCAGTCACTGTAGATGAATACCAAAAAGCTCAGGAA
    AAATGGATGAAAGAAAAAGAAGAGTCTAATAAAAAGGCTCAAGAAGATCTCGCAAAACAT
    GTGAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1089

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPNOXC_RS01970 [old locus tags: SPNOXC03630 SPNOXC_03630 ]
  • symbol: SPNOXC_RS01970
  • description: peptide ABC transporter ATP-binding protein
  • length:
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

⊟Function[edit | edit source]

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

J P Claverys, B Grossiord, G Alloing
Is the Ami-AliA/B oligopeptide permease of Streptococcus pneumoniae involved in sensing environmental conditions?
Res Microbiol: 2000, 151(6);457-63
[PubMed:10961459] [WorldCat.org] [DOI] (P p)A R Kerr, P V Adrian, S Estevão, R de Groot, G Alloing, J-P Claverys, T J Mitchell, P W M Hermans
The Ami-AliA/AliB permease of Streptococcus pneumoniae is involved in nasopharyngeal colonization but not in invasive disease.
Infect Immun: 2004, 72(7);3902-6
[PubMed:15213133] [WorldCat.org] [DOI] (P p)Fauzy Nasher, Manfred Heller, Lucy J Hathaway
Streptococcus pneumoniae Proteins AmiA, AliA, and AliB Bind Peptides Found in Ribosomal Proteins of Other Bacterial Species.
Front Microbiol: 2017, 8;2688
[PubMed:29379482] [WorldCat.org] [DOI] (P e)

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