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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 15-OCT-2021

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae SP49
  • locus tag: BMJ42_RS00630 [old locus tag: BMJ42_00128 ]
  • pan locus tag?: PNEUPAN000624000
  • symbol: BMJ42_RS00630
  • pan gene symbol?: —
  • synonym:
  • product: phage tail protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: BMJ42_RS00630 [old locus tag: BMJ42_00128 ]
  • symbol: BMJ42_RS00630
  • product: phage tail protein
  • replicon: chromosome
  • strand: +
  • coordinates: 91426..95991
  • length: 4566
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NZ_CP018136 (91426..95991) NCBI
  • BioCyc: BMJ42_RS00630 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    4501
    4561
    ATGCTTTTGACAATCCATGATGCAAATTTACAAAAGGTAGCATTTATTGATAACGAAAAA
    CAAGGTACGTTAAATTATTACGATGATACTTGGACAAGAAGTCTTGCAACAGGTTCGTCA
    ACGTTTGAGTTTACGGTATTTAAAAAGGCTGTAAAGTCTGATTTACCTCTTGCTAAAGCC
    TATCATCATTTGAATGAGCATGCATTTGTCTCATTTAAGTACAAGGGTAAAAGCTTTGTG
    TTTAATATCATGATTGTTGAAGAAAATGAGCAGACAATCAAATGTTATTGTGAAAATCTC
    AATCTTGAGTTAATCAATGAGCTTGCGAACCCTTATAAATCTAACAAAGCGATGACTTTC
    AAAGAGTATTGTGAGGCGATGGATCTTTTAAATTATACTCACCTTTCTATTGGTATCAAT
    GAAATATCAGATTATAAGCGTACTCTGGAATGGGAGGGGCAAGAAACCAAACTAGCCCGT
    CTATTAAGCCTAGCCAAACGATTTGATGCTGAGATTGAATTTGATACACAGTTAAATGCT
    GATAGCACTATCAAAAAGTTTAGTGTTAATGTTTATCATGAAAACGATGACAACCATCAA
    GGGGTGGGACGTGTAAGAAATGATGTCATTGTTAAATACGGAAAAAACATCCACTCTATT
    ACAAGAAAAGTGGATAAGACTGGTATTTTCAATACAATCAGACCGACTGGTAAAATGCCA
    ACGGTTGAAGAAGAACCGAGCGGAGATAAGGGCTCCAAAAGCGAAACTGTAAAAAATGCA
    GATGGTTCAACGACGAAAACCACAATCTCTACAGCCTCAGATGGGACTAAGAGCAAAACT
    ATTGTCCACACTAAAGTTACAAAGTTAGCGGACAAGACACGGATCACAACGACCACAACG
    ACTCGTTCTGATGGTTCCATAGAACAAACTGTTACAACCAGCAAAAAAGGCGGAGCATCA
    ACGTCTGAAACAAAAGTCTTGAAAAAACCAAATCCAAAAGAAAAAACAAATACAACTGAG
    GATGTTTTGACGATTGAGGGATTGGATGAATGGGAAGTAAAGAACGAGAAAGGGATAGTT
    GAATTTTATCAAAGAGGGCAAGCACTGTATGCGCCTATTTCAATGCAACTATATCCCTCA
    ACCTTTACTCATTCAACAGGGGAGCTTGACCAGTGGACAAGAAAAGATTTTCATTTTGAA
    ACAGATGAGCCAAACGAGTTAAGACGTTTAGGTTATCTCAAATTGAAAAAGTATTGTTAT
    CCAGCTATCACTTATGAAGTTGATGGCTTTGTCGATGCTGATATTGGAGATACTGTTAAA
    GTCCATGATGACGGTTTTGCCCCTCTATTGATGATTCAAGCACGGGTTACTGATCAAAAA
    ATCAGTTTCACAAATCCAGTGAGAAATAAGACAATATTTGACAATTTCAAGGCACTTGAA
    AACAAACTATCAGCTGATATCCAGTCAGCCTTTGAGAGATTGTTTGAAGCTGCTAAACCA
    TATACTATCAAATTGTCAACGGACAATGGTGTTATCTTTAAAAATCAGATCGGCCAGAGT
    CTAGTAACCCCAACCTTATACAAGGGAGGAAAACCAGTCGTTGTTGGTGTTACTTGGCGA
    TGGGCACTTGATGGAGAAGTAACAACAGGGATGACTTACTTAGTTAGAGGCTCAAATGTA
    ACTGATACAGTTACTCTGACAGTTGCAGCTTACATTGGAAATAAAGAGGTTGCTGTTGAT
    GAGATATCGCTTGTTAATGTTGCTGATGGAAAACTTGGTACACCTGGAACTCCAGGGCGA
    GATGGCCGTACTCCTTATGTCCATACAGCATGGGCTAATAATGCAACAGGAACAGATGGA
    TTTAGTCTTGATAGCTCAATCAATAAACTCTATATTGGTATTTATACAGACTTTGAACCA
    AACGATAGCACCGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGAGACAAGGGAGAC
    AAGGGAGAAAAAGGAGAACCGGGACAACGTGGTTTAGATGGCTTGCAAGGTGCAAGAGGT
    GAACAAGGATTACCTGGTCGCAATGGTGCAGATGGCCGTACTCAATACACTCACATAGCT
    TACAGCAATAGCGCTGATGGAACTAAGGATTTTTCTGTAAGCGCCTCTGATAGAGCTTAT
    ATCGGTATGTATGTTGATTTTAATAGTGCTGATAGCAATACTCCATCTGATTACAATTGG
    ACACTTGTAAAAGGATCTGATGGCGCAAATGGTGTGGCAGGTAAGGCTGGTACAGATGGT
    AGGACACCATACTTACATATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCA
    ACTACTGACAGTACAAATAAAACGTACATCGGAACATACACAGATTACACTCAGGCAGAT
    AGTACAGATTACAGAGTGTATAAGTGGACGTTGATAAAAGGGGCAGATGGTACTGGTATT
    TCTAATGTAACTAATTATTATTTAGCTACTACAGTCTCAACAGGTATCACAAGAACAAGC
    GCAGGGTGGACAACTACGCCACAGCCTATCACATCAGACAAGCGTTATTTATGGAATTAT
    CGAGTTGAGCTATACACAAACGGTACAAGTAAGACAACAGAGCCTGCTGTTATTGGTGTG
    CACGGGGAAAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGCGCACGAGGT
    GAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCC
    TATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTT
    GGAGTGTACATTGATTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACA
    AGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGG
    ACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACT
    ACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGC
    ACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAAAAAGGCGAT
    AAAGGAGAACGTGGATTACAAGGTTTACAAGGTTTACAAGGCTTGCAAGGCGCACGAGGT
    GAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCC
    TATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTT
    GGAGTGTACATTGATTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACA
    AGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGG
    ACACCTTATGTTCACTTTGCGTATTCTGAAAATGCAGATGGATCAGGTTTGACAATGACA
    GATAACGGACAGCGTTATTTTGGTCATTATTCAGATTATGAGAAACCTGATAGTTCGGAT
    AAAACTAAGTACAAATGGGCTGATCGTTGGGCTAAAGTTGATGGAGGTTATGTAAATATC
    TATGCATTGTCTAAGAATAGAAGTATTGGGAAATCTTATCATGTTTCTGAATTTAATATG
    GATGTACTTTCAGGAAATATCACTCTAAAAGCAATTGGGTCAGATCCATACATTGGCGCC
    GTTTCTTCTCATCCAGGTATTTTTATAAAGCAACAGGGAATGAAAATCCCAGTTATACAA
    GGGAGATCTATTTGTATAACAATAACAAATCCTTTATTTAGAAAAAATTACATCTCGTTT
    TTTAATTCATTAGGTAAAACTGTTAAAACATATAAGCATTACAACACAAATAAATTTTTA
    ATATCTTCAGCTGATTTGGTAGGTGTTGAATTTATCGCTTTACGATATGGTGCAGGAAGC
    TCGAATATACAAATTGGAACCGTACTAGAGACAAAAGTAAAGGTAGAATATGGAACCGTG
    CATAGCGACTGGTCGCCCGCTCCAGAAGATATTGAAAGTAATATTAACTCTAAAGCTGAT
    CAGGGGCTGACTCAAGAGCAGTTAAATGCCCTCAATGAGAAGTCACAGATTTTAGAGGCT
    GAAATGAAAGCGAAAGCATCGATGGAGGCCTTTAGTGAATTAGAAAAAGCATATAATGCC
    TTTGTGAAATTAAATGCAGATAGTCAAAAAAAATCTGAGTCTGATTTAGTTGAAGCAGGT
    AGAAGAATTGATTTGCTGACGACACAATTTGGAGGATTAGCAGAGCTTAAAACATTCATT
    GATACTTACATGAAAAGCACAAATGAGGGCTTGATTATAGGTAAGAATGATGCAAGCTCT
    ACTATTAAGGTATCAAGTGATAGAATATCCATGTTTTCTGCAGGTAAGGAAGTTATGTAC
    ATTTCGCAAGGTGTAATAAATATTGATAATGGTATTTTTACTGCATCAATTCAAATTGGA
    CGTTTTAGAACAGAACAGTATCATCTTAACAAAGATGTGAATGTCATACGATATATAGGA
    GGTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
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    1260
    1320
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    1560
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    1680
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    2160
    2220
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    2340
    2400
    2460
    2520
    2580
    2640
    2700
    2760
    2820
    2880
    2940
    3000
    3060
    3120
    3180
    3240
    3300
    3360
    3420
    3480
    3540
    3600
    3660
    3720
    3780
    3840
    3900
    3960
    4020
    4080
    4140
    4200
    4260
    4320
    4380
    4440
    4500
    4560
    4566

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: BMJ42_RS00630 [old locus tag: BMJ42_00128 ]
  • symbol: BMJ42_RS00630
  • description: phage tail protein
  • length: 1521
  • theoretical pI: 8.09772
  • theoretical MW: 167422
  • GRAVY: -0.618803

⊟Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Mobile and extrachromosomal element functions Prophage functions phage holin, LL-H family (TIGR01673; HMM-score: 9.1)
  • TheSEED:
  • PFAM:
    no clan defined Collagen; Collagen triple helix repeat (20 copies) (PF01391; HMM-score: 78.4)
    and 1 more
    SH3DP; SH3 fold domain associated with phage DNA polymerases (PF20287; HMM-score: 23.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.006881
    • TAT(Tat/SPI): 0.000672
    • LIPO(Sec/SPII): 0.000956
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_073176633 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MLLTIHDANLQKVAFIDNEKQGTLNYYDDTWTRSLATGSSTFEFTVFKKAVKSDLPLAKAYHHLNEHAFVSFKYKGKSFVFNIMIVEENEQTIKCYCENLNLELINELANPYKSNKAMTFKEYCEAMDLLNYTHLSIGINEISDYKRTLEWEGQETKLARLLSLAKRFDAEIEFDTQLNADSTIKKFSVNVYHENDDNHQGVGRVRNDVIVKYGKNIHSITRKVDKTGIFNTIRPTGKMPTVEEEPSGDKGSKSETVKNADGSTTKTTISTASDGTKSKTIVHTKVTKLADKTRITTTTTTRSDGSIEQTVTTSKKGGASTSETKVLKKPNPKEKTNTTEDVLTIEGLDEWEVKNEKGIVEFYQRGQALYAPISMQLYPSTFTHSTGELDQWTRKDFHFETDEPNELRRLGYLKLKKYCYPAITYEVDGFVDADIGDTVKVHDDGFAPLLMIQARVTDQKISFTNPVRNKTIFDNFKALENKLSADIQSAFERLFEAAKPYTIKLSTDNGVIFKNQIGQSLVTPTLYKGGKPVVVGVTWRWALDGEVTTGMTYLVRGSNVTDTVTLTVAAYIGNKEVAVDEISLVNVADGKLGTPGTPGRDGRTPYVHTAWANNATGTDGFSLDSSINKLYIGIYTDFEPNDSTDPKKYKWAKVKGDKGDKGEKGEPGQRGLDGLQGARGEQGLPGRNGADGRTQYTHIAYSNSADGTKDFSVSASDRAYIGMYVDFNSADSNTPSDYNWTLVKGSDGANGVAGKAGTDGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDYRVYKWTLIKGADGTGISNVTNYYLATTVSTGITRTSAGWTTTPQPITSDKRYLWNYRVELYTNGTSKTTEPAVIGVHGEKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYVHFAYSENADGSGLTMTDNGQRYFGHYSDYEKPDSSDKTKYKWADRWAKVDGGYVNIYALSKNRSIGKSYHVSEFNMDVLSGNITLKAIGSDPYIGAVSSHPGIFIKQQGMKIPVIQGRSICITITNPLFRKNYISFFNSLGKTVKTYKHYNTNKFLISSADLVGVEFIALRYGAGSSNIQIGTVLETKVKVEYGTVHSDWSPAPEDIESNINSKADQGLTQEQLNALNEKSQILEAEMKAKASMEAFSELEKAYNAFVKLNADSQKKSESDLVEAGRRIDLLTTQFGGLAELKTFIDTYMKSTNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVINIDNGIFTASIQIGRFRTEQYHLNKDVNVIRYIGG

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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