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TIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 31-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae Hungary19A-6
- locus tag: SPH_0115
- pan locus tag?:
- symbol: SPH_0115
- pan gene symbol?: —
- synonym:
- product: phage minor structural protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPH_0115
- symbol: SPH_0115
- product: phage minor structural protein
- replicon: chromosome
- strand: +
- coordinates: 87969..94910
- length: 6942
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP000936 (87969..94910) NCBI
- BioCyc:
- MicrobesOnline: 5694970 MicrobesOnline
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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6901ATGCTTTTAACAATTCATGATGCAAACTTACAAAAGGTGGCATTTATTGATAACGAAAAA
CAAGGTACGTTAAATTATTACGATGATACTTGGACAAGAAGTCTTGCAACAGGTTCGTCA
ACGTTTGAGTTTACGGTATTTAAAAAGGCTGTAAAGTCTGATTTACCTCTTGCTAAAGCC
TATCATCATTTGAATGAGCATGCATTTGTCTCATTTAAGTACAAGGGTAAAAGCTTTGTG
TTTAATATCATTATTGTTGAAGAAAATGAGCAGACAATCAAATGTTATTGTGAAAATCTC
AATCTTGAGTTAATCAATGAGCTTGCGAACCCTTATAAATCTAACAAAGCGATGACTTTC
AAAGAGTATTGTGAGGCGATGGATCTTTTAAATTATACTCACCTTTCTATTGGTATCAAT
GAAATATCAGATTATAAGCGTACTCTGGAATGGGAGGGGCAAGAAACCAAACTAGCCCGT
CTATTAAGCCTAGCCAAACGATTTGATGCTGAGATTGAATTTGATACACAGTTAAATGCT
GATAGTACTATCAAAAAGTTTAGTGTTAATGTTTATCATGAAAACGATGACAACCATCAA
GGGGTGGGACGTGTAAGAAATGATGTCATTGTTAAATACGGAAAAAACATCCACTCTATT
ACAAGAAAAGTGGATAAGACTGGTATTTTCAATACAATCAGACCGACTGGTAAAATGCCA
ACGGTTGAAGAAGAACTGAGCGGAGATAAGGGCTCCAAAAGCGAAACTGTAAAAAATGCA
GATGGTTCAACGACGAAAACCACAATCTCTACAGCCTCAGATGGGACTAAGAGCAAAACT
ATTGTCCACACTAAAGTTACAAAGTTAGCGGACAAGACACGGATCACAACGACCACAACG
ACTCGTTCTGATGGTTCCATAGAACAAACTGTTACAACCAGCAAAAAAGGCGGAGCATCA
ACGTCTGAAACAAAAGTCTTGAAAAAACCAAATCCAAAAGAAAAAACAAATACAACTGAG
GATGTTTTGACGATTGAGGGATTGGATGAATGGGAAGTAAAGAACGAGAAAGGGATAGTT
GAATTTTATCAAAGAGGGCAAGCACTGTATGCGCCTATTTCAATGCAACTATATCCCTCA
ACCTTTACTCATTCAACAGGGGAGCTTGACCAGTGGACAAGAAAAGATTTTCATTTTGAA
ACAGATGAGCCAAACGAGTTAAGACGTTTAGGTTATCTCAAATTGAAAAAGTATTGTTAT
CCAGCTATCACTTATGAAGTTGATGGCTTTGTCGATGCTGATATTGGAGATACTGTTAAA
GTCCATGATGACGGTTTTGCCCCTCTATTGATGATTCAAGCACGGGTTACTGATCAAAAA
ATCAGTTTCACAAATCCAGTGAGAAATAAGACAATATTTGACAATTTCAAGGCACTTGAA
AACAAACTATCAGCTGATATCCAGTCAGCCTTTGAGAGATTGTTTGAAGCTGCTAAACCA
TATACTATCAAATTATCAACGGACAATGGTGTTATCTTTAAAAATCAGATCGGCCAGAGT
CTAGTAACCCCAACCTTATACAAGGGAGGAAAACCAGTCGTTGTTGGTGTTACTTGGCGA
TGGGCACTTGATGGAGAAGTAACAACAGGGATGACTTACTTAGTTAGAGGCTCAAATGTA
ACTGATACAGTTACTCTGACAGTTGCAGCTTACATTGGAAATAAAGAGGTTGCTGTTGAT
GAGATATCGCTTGTTAATGTTGCTGATGGAAAACTTGGTACACCTGGAACTCCAGGGCGA
GATGGCCGTACTCCTTATGTCCATACAGCATGGGCTAATAATGCAACAGGAACAGATGGA
TTTAGTCTTGATAGCTCAATCAATAAACTCTATATTGGTATTTATACAGACTTTGAACCA
AACGATAGCACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAA
AAAGGAGATAAAGGAGAACCGGGACAACGTGGTTTAGATGGCTTGCAAGGTGCAAGAGGT
GAACAAGGATTACCTGGTCGCAATGGTGCAGATGGCCGTACTCAATACACTCACATAGCT
TACAGCAATAGCGCTGATGGAACTAAGGATTTTTCTGTAAGCGCCTCTGATAGAGCTTAT
ATCGGTATGTATGTTGATTTTAATAGTGCTGATAGTAATACTCCATCTGATTACAATTGG
ACACTTGTAAAAGGAGCTGATGGCGCAAATGGCGTGGCAGGTAAGGCTGGTGCAGATGGT
AGGACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCA
ACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGAT
AGCACAGATTACAGAGTGTATAAGTGGACGTTGATAAAAGGGGCAGATGGTACTGGTATT
TCTAATGTAACTAATTATTATTTAGCTACTACAGTCTCAACAGGTATCACAAGAACAAGC
GCAGGGTGGACAACTACGCCACAGCCTATCACATCAGACAAGCGTTATTTATGGAATTAT
CGAGTTGAGCTATACACAAACGGTACAAGTAAGACAACAGAGCCTACTGTTATTGGTGTG
CACGGGGAAAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGTGCACGAGGT
GAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCC
TATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTT
GGGGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACA
AGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGG
ACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACT
ACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGC
ACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGAGACAAGGGAGAAAAAGGAGAT
AAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGTGCACGAGGTGAACAAGGT
ATTCCTGGACCTAGAGGGGCAGATGGTCGTACACAATATACTCACATGGCCTATGCCGAT
AACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTAC
ATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAA
GGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATAC
TTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGT
ACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGCACAGACCCT
AAAAAATACAAGTGGGCTAAAGTAAAAGGAGACAAGGGAGAAAAAGGAGATAAAGGAGAA
CGTGGATTACAAGGTTTACAAGGCTTGCAAGGTGCACGAGGTGAACAAGGTATTCCTGGA
CCTAGAGGGGCAGATGGTCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACA
GGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTT
AATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGAT
GGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATA
GCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGTACAAATAAA
ACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGTACCGACCCTAAAAAATAC
AAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAAAAAGGCGATAAAGGAGAACGTGGATTA
CAAGGTTTACAAGGCTTGCAAGGCGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGG
GCAGATGGTCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGA
TTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTTAATCCAACA
GACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAAT
GGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATAGCTTACGCC
ACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGTACAAATAAAACGTATATC
GGAACATACACAGATTACACTCAGGCAGATAGCACAGACCCTAAAAAATACAAGTGGGCT
AAAGTAAAAGGAGACAAGGGAGAAAAAGGAGATAAAGGAGAACGTGGATTACAAGGTTTA
CAAGGCTTGCAAGGTGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGT
CGTACACAATATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAA
ACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTTAATCCAACAGACAGCAGA
AATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCA
GGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAAT
AACGGCTCACAAGGCTTCTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATAC
ACAGATTACACTCAGGCAGATAGCACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAA
GGAGACAAGGGAGAAAAAGGAGATAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTG
CAAGGCGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGTCGTACACAA
TATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACT
GACAAAGCCTTTGTTGGGGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCT
GATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCT
GGTGCAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCA
CAAGGCTTCTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTAC
ACTCAGGCAGATAGCACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGAGACAAG
GGAGAAAAAGGAGATAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGTGCA
CGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGTCGTACACAATATACTCAC
ATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCC
TTTGTTGGGGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGC
TGGACAAGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAAGGCTGGTGCAGAT
GGTAGGACATCCTATTTCCATATAGCATACGCAGCAAGTGCAGACGGATCACGCGAATTT
AGTTTAGAGGATAATCGCCAGCAATATATGGGCTATTATTCCGATTTTACCGCAGCAGAT
AGTAGAGATCGAACTAAGTATAAATGGTTTGACCGACTAGCTAATGTTCAAGTGGGTTCC
CAGAACTTGCTTAGAAATACTGCAACTCTTCCTATTAAAAATGGATTAGACGGTACCTGG
CGGAGTACGTCAGGTGGTAACGGAGTAGCGGAACCTGTTACCTTGGATAAATATCCTGTA
CCTGGAATCCTAAAAGGTGTTCGAGTTAAAAACAACACCAACGGGGGTAATAAGGACCTT
AGCCAGATTATTAACTTAGTTATAGGTCAACGTTATACAATATCCTGCTGGGCTCGTGTA
AGCTCTACAAGTGATCGATCTACTGTGAACCTACTAGTAAGGTCCTGGACAGTGAACGAT
ACTAATAGGATACTTTTTAAGGCTATAAGTAATAAGACTTGGGTTAAGTACAGTCTTTCC
TTCACTGCGGACGCTGAGAAAAATTCAATTCAGTTCGGTCAAAACGGACCAGGTAATATT
GAAATCTGTGGAATGAAATTAGAACTCGGTAATGTAGCCACTGATTGGTCCTTATCCGTA
GAAGACATTCAATCTCAGTTAGACGGAAAAGCTGACCAAAAGCTAACTCAACAACAATTG
ACGGCCCTAACTGAAAAGGCTCAGCTACACGACGCAGAGTTGAAAGCTAAGGCTACGATG
GAACAATTAAGTGATTTAGAAAAAGCATATAATGCCTTTGTGAAATCAAATGCAGATAGT
CGAAAAAAATCTGAGTCTGATTTAGTTGAAGCAGGTAGAAGAATTGATTTGCTGACGACA
CAATTTGGAGGATTAGCAGAGCTTAAAACATTCATTGATACTTACATGAAAAGCACAAAT
GAGGGCTTGATTATAGGTAAGAATGATGCAAGCTCTACTATTAAGGTATCAAGTGATAGA
ATATCCATGTTTTCTGCAGGTAAGGAAGTTATGTACATTTCGCAAGGTGTAATAAATATT
GATAATGGTATTTTTACTGCATCAATTCAAATTGGACGTTTTAGAACAGAACAGTATCAT
CTTAACAAAGATGTGAATGTCATACGATATATAGGAGGTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPH_0115
- symbol: SPH_0115
- description: phage minor structural protein
- length: 2313
- theoretical pI: 9.23628
- theoretical MW: 252414
- GRAVY: -0.790056
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- Phage tail assembly
- PFAM: no clan defined Collagen; Collagen triple helix repeat (20 copies) (PF01391; HMM-score: 185.5)and 3 moreSH3DP; SH3 fold domain associated with phage DNA polymerases (PF20287; HMM-score: 26.1)Auxin_resp; Auxin response factor (PF06507; HMM-score: 16.7)GBD (CL0202) DUF642; Protein of unknown function (DUF642) (PF04862; HMM-score: 16)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.006881
- TAT(Tat/SPI): 0.000672
- LIPO(Sec/SPII): 0.000956
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MLLTIHDANLQKVAFIDNEKQGTLNYYDDTWTRSLATGSSTFEFTVFKKAVKSDLPLAKAYHHLNEHAFVSFKYKGKSFVFNIIIVEENEQTIKCYCENLNLELINELANPYKSNKAMTFKEYCEAMDLLNYTHLSIGINEISDYKRTLEWEGQETKLARLLSLAKRFDAEIEFDTQLNADSTIKKFSVNVYHENDDNHQGVGRVRNDVIVKYGKNIHSITRKVDKTGIFNTIRPTGKMPTVEEELSGDKGSKSETVKNADGSTTKTTISTASDGTKSKTIVHTKVTKLADKTRITTTTTTRSDGSIEQTVTTSKKGGASTSETKVLKKPNPKEKTNTTEDVLTIEGLDEWEVKNEKGIVEFYQRGQALYAPISMQLYPSTFTHSTGELDQWTRKDFHFETDEPNELRRLGYLKLKKYCYPAITYEVDGFVDADIGDTVKVHDDGFAPLLMIQARVTDQKISFTNPVRNKTIFDNFKALENKLSADIQSAFERLFEAAKPYTIKLSTDNGVIFKNQIGQSLVTPTLYKGGKPVVVGVTWRWALDGEVTTGMTYLVRGSNVTDTVTLTVAAYIGNKEVAVDEISLVNVADGKLGTPGTPGRDGRTPYVHTAWANNATGTDGFSLDSSINKLYIGIYTDFEPNDSTDPKKYKWAKVKGDKGEKGDKGEPGQRGLDGLQGARGEQGLPGRNGADGRTQYTHIAYSNSADGTKDFSVSASDRAYIGMYVDFNSADSNTPSDYNWTLVKGADGANGVAGKAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDYRVYKWTLIKGADGTGISNVTNYYLATTVSTGITRTSAGWTTTPQPITSDKRYLWNYRVELYTNGTSKTTEPTVIGVHGEKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGKAGADGRTSYFHIAYAASADGSREFSLEDNRQQYMGYYSDFTAADSRDRTKYKWFDRLANVQVGSQNLLRNTATLPIKNGLDGTWRSTSGGNGVAEPVTLDKYPVPGILKGVRVKNNTNGGNKDLSQIINLVIGQRYTISCWARVSSTSDRSTVNLLVRSWTVNDTNRILFKAISNKTWVKYSLSFTADAEKNSIQFGQNGPGNIEICGMKLELGNVATDWSLSVEDIQSQLDGKADQKLTQQQLTALTEKAQLHDAELKAKATMEQLSDLEKAYNAFVKSNADSRKKSESDLVEAGRRIDLLTTQFGGLAELKTFIDTYMKSTNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVINIDNGIFTASIQIGRFRTEQYHLNKDVNVIRYIGG
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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