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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 08-SEP-2024

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae BM6001
  • locus tag: ODS73_RS10740 [old locus tag: ODS73_10730 ]
  • pan locus tag?: PNEUPAN000631000
  • symbol: ODS73_RS10740
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: ODS73_RS10740 [old locus tag: ODS73_10730 ]
  • symbol: ODS73_RS10740
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2046900..2052917
  • length: 6018
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NZ_CP107038 (2046900..2052917) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    4501
    4561
    4621
    4681
    4741
    4801
    4861
    4921
    4981
    5041
    5101
    5161
    5221
    5281
    5341
    5401
    5461
    5521
    5581
    5641
    5701
    5761
    5821
    5881
    5941
    6001
    ATGCTTTTGACAATCCATGATGCAAATTTACAAAAGGTAGCATTTATTGATAACGAAAAA
    CAAGGTACGTTAAATTATTACGATGATACTTGGACAAGAAGTCTTGCAACAGGTTCGTCA
    ACGTTTGAGTTTACGGTATTTAAAAAGGCTGTAAAGTCTGATTTACCTCTTGCTAAAGCC
    TATCATCATTTGAATGAGCATGCATTTGTTTCATTTAAGTACAAGGGTAAAAGCTTTGTG
    TTTAATATCATGATTGTTGAAGAAAATGAGCAGACAATCAAATGTTATTGTGAAAATCTC
    AATCTTGAGTTAATCAATGAGCTTGCGAACCCTTATAAATCTAACAAAGCGATGACTTTC
    AAAGAGTATTGTGAGGCGATGGATCTTTTAAATTATACTCACCTTTCTATTGGTATCAAT
    GAAATATCAGATTATAAGCGTACTCTGGAATGGGAGGGGCAAGAAACCAAACTAGCCCGT
    CTATTAAGCCTAGCCAAACGATTTGATGCTGAGATTGAATTTGATACACAGTTAAATGCT
    GATAGCACTATCAAAAAGTTTAGTGTTAATGTTTATCATGAAAACGATGACAACCATCAA
    GGGGTGGGACGTGTAAGAAATGATGTCATTGTTAAATACGGAAAAAACATCCACTCTATT
    ACAAGAAAAGTGGATAAGACTGGTATTTTCAATACAATCAGACCGACTGGTAAAATGCCA
    ACGGTTGAAGAAGAACCGAGCGGAGATAAGGGCTCCAAAAGCGAAACTGTAAAAAATGCA
    GATGGTTCAACGACGAAAACCACAATCTCTACAGCCTCAGATGGGACTAAGAGCAAAACT
    ATTGTCCACACTAAAGTTACAAAGTTAGCGGACAAGACACGGATCACAACGACCACAACG
    ACTCGTTCTGATGGTTCCATAGAACAAACTGTTACAACCAGCAAAAAAGGCGGAGCATCA
    ACGTCTGAAACAAAAGTCTTGAAAAAACCAAATCCAAAAGAAAAAACAAATACAACTGAG
    GATGTTTTGACGATTGAGGGATTGGATGAATGGGAAGTAAAGAACGAGAAAGGGATAGTT
    GAATTTTATCAAAGAGGGCAAGCACTGTATGCGCCTATTTCAATGCAACTATATCCCTCA
    ACCTTTACTCATTCAACAGGGGAGCTTGACCAGTGGACAAGAAAAGATTTTCATTTTGAA
    ACAGATGAGCCAAACGAGTTAAGACGTTTAGGTTATCTCAAATTGAAAAAGTATTGTTAT
    CCAGCTATCACTTATGAAGTTGATGGCTTTGTCGATGCTGATATTGGAGATACTGTTAAA
    GTCCATGATGACGGTTTTGCCCCTCTATTGATGATTCAAGCACGGGTTACTGATCAAAAA
    ATCAGTTTCACAAATCCATTGAGAAATAAGACAATATTTGACAATTTCAAGGCACTTGAA
    AACAAACTATCAGCTGATATCCAGTCAGCCTTTGAGAGATTGTTTGAAGCTGCTAAACCA
    TATACTATCAAATTGTCAACGGACAATGGTGTTATCTTTAAAAATCAGATCGGCCAGAGT
    CTAGTAACCCCAACCTTATACAAGGGAGGAAAACCAGTCGTTGTTGGTGTTACTTGGCGA
    TGGGCACTTGATGGAGAAGTAACAACAGGGATGACTTACTTAGTTAGAGGCTCAAATGTA
    ACTGATACAGTTACTCTGACAGTTGCAGCTTACATTGGAAATAAAGAGGTTGCTGTTGAT
    GAGATATCGCTTGTTAATGTTGCTGATGGAAAACTTGGTACACCTGGAACTCCAGGGCGA
    GATGGCCGTACTCCTTATGTCCATACAGCATGGGCTAATAATGCAACAGGAACAGATGGA
    TTTAGTCTTGATAGCTCAATCAATAAACTCTATATTGGTATTTATACAGACTTTGAACCA
    AACGATAGCACCGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAC
    AAGGGAGAAAAAGGAGAACCGGGACAACGTGGTTTAGATGGCTTGCAAGGTGCAAGAGGT
    GAACAAGGATTACCTGGTCGCAATGGTGCAGATGGCCGTACTCAATACACTCACATAGCT
    TACAGCAATAGCGCTGATGGAACTAAGGATTTTTCTGTAAGCGCCTCTGATAGAGCTTAT
    ATCGGTATGTATGTTGATTTTAATAGTGCTGATAGTAATACTCCATCTGATTACAATTGG
    ACACTTGTAAAAGGAGCTGATGGCGCAAACGGCGTGGCAGGTAAGGCTGGTACAGATGGT
    AGGACACCATACTTACACATAGCTTACGCCACATCAAATAATGGATCACAAGGTTTTTCA
    ACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGAT
    AGCACAGATTACAGAGTGTATAAGTGGACGTTAATAAAAGGGGCAGATGGTACTGGTATT
    TCTAATGTAACTAATTATTATTTAGCTACTACAGTCTCAACAGGTATCACAAGAACAAGC
    GCAGGGTGGACAACTACGCCACAGCCTATCACATCAGACAAGCGTTATTTATGGAATTAT
    CGAGTTGAGCTATACACAAACGGTACAAGTAAGACAACAGAGCCTACTGTTATTGGTGTG
    CACGGGGAAAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGCGCACGAGGT
    GAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGTCGTACACAATATACTCACATGGCC
    TATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTT
    GGAGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACA
    AGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGG
    ACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACT
    ACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGC
    ACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGTGACAAGGGAGAAAAAGGCGAT
    AAAGGAGAACCAGGACAACGTGGTTTACAAGGCTTGCAAGGTGCACGAGGTGAACAAGGT
    ATTCCTGGACCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCCTATGCCGAT
    AACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGAGTGTAC
    ATTGATTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAA
    GGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATAC
    TTACACATAGCTTACGCCACATCAAATAATGGATCACAAGGCTTCTCAACTACTGACAGT
    ACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGTACCGACCCT
    AAAAAATACAAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAAAAAGGCGATAAAGGAGAA
    CCAGGACAACGTGGTTTACAAGGCTTACAAGGCTTGCAAGGCGCACGAGGTGAACAAGGT
    ATTCCTGGACCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCCTATGCCGAT
    AACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTAC
    ATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAA
    GGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATAC
    TTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGT
    ACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGCACAGACCCT
    AAAAAATACAAGTGGGCTAAAGTAAAAGGTGACAAGGGAGAAAAAGGCGATAAAGGAGAA
    CCAGGACAACGTGGTTTACAAGGCTTGCAAGGTGCACGAGGTGAACAAGGTATTCCTGGA
    CCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACA
    GGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTT
    AATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGAT
    GGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATA
    GCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGTACAAATAAA
    ACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGTACCGACCCTAAAAAATAC
    AAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAAAAAGGCGATAAAGGAGAACCAGGACAA
    CGTGGTTTACAAGGCTTACAAGGCTTGCAAGGCGCACGAGGTGAACAAGGTATTCCTGGA
    CCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACA
    GGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTT
    AATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGAT
    GGCGCAAATGGCGTGGCAGGTAAGGCTGGTGCAGATGGTAGGACATCCTATTTCCATATA
    GCATACGCAGCAAGTGCAGACGGATCACGCGAATTTAGTTTAGAGGATAATCGCCAGCAA
    TATATGGGCTATTATTCCGATTTTACCGCAGCAGATAGTAGAGATCGAACTAAGTATAAA
    TGGTTTGACCGACTAGCTAATGTTCAAGTGGGTTCCCAGAACTTGCTTAGAAATACTGCA
    ACTCTTCCTATTAAAAATGGATTAGACGGTACCTGGCGGAGTACGTCAGGTGGTAACGGA
    GTAGCGGAACCTGTTACCTTGGATAAATATCCTGTACCTGGAATCCTAAAAGGTGTTCGA
    GTTAAAAACAACACCAACGGGGGTAATAAGGACCTTAGCCAGATTATTAACTTAGTTATA
    GGTCAACGTTATACAATATCCTGCTGGGCTCGTGTAAGCTCTACAAGTGATCGATCTACT
    GTGAACCTACTAGTAAGGTCCTGGACAGTGAACGATACTAATAGGATACTTTTTAAGGCT
    ATAAGTAATAAGACTTGGGTTAAGTACAGTCTTTCCTTCACTGCGGACGCTGAGAAAAAT
    TCAATTCAGTTCGGTCAAAACGGACCAGGTAATATTGAAATCTGTGGAATGAAATTAGAA
    CTCGGTAATGTAGCCACTGATTGGTCCTTATCCGTAGAAGACATTCAATCTCAGTTAGAC
    GGAAAAGCTGACCAAAAGCTAACTCAACAACAATTGACGGCCCTAACTGAAAAGGCTCAG
    TTACACGACGCAGAGTTGAAAGCTAAGGCTACGATGGAACAATTAAGTGATTTAGAAAAA
    GCATATAATGCCTTTGTGAAATCAAATGCAGATAGTCGAAAAAAATCTGAGTCTGATTTA
    GTTGAAGCAGGTAGAAGAATTGATTTGCTGACGACACAATTTGGAGGATTAGCAGATCTT
    AAAACATTCATTGATACTTACATGAAAAGCACAAATGAGGGCTTGATTATAGGTAAGAAT
    GATGCAAGCTCTACTATTAAGGTATCAAGTGATAGAATATCCATGTTTTCTGCAGGTAAG
    GAAGTTATGTACATTTCGCAAGGTGTAATAAATATTGATAATGGTATTTTTACTGCATCA
    ATTCAAATTGGACGTTTTAGAACAGAACAGTATCATCTTAACAAAGATGTGAATGTCATA
    CGATATATAGGAGGTTAA
    60
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    180
    240
    300
    360
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    480
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    660
    720
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    840
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    1740
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    2040
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    2160
    2220
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    2640
    2700
    2760
    2820
    2880
    2940
    3000
    3060
    3120
    3180
    3240
    3300
    3360
    3420
    3480
    3540
    3600
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    3720
    3780
    3840
    3900
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    4020
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    4140
    4200
    4260
    4320
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    4440
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    4740
    4800
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    5100
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    5220
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    5340
    5400
    5460
    5520
    5580
    5640
    5700
    5760
    5820
    5880
    5940
    6000
    6018

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: ODS73_RS10740 [old locus tag: ODS73_10730 ]
  • symbol: ODS73_RS10740
  • description: hypothetical protein
  • length: 2005
  • theoretical pI: 9.07799
  • theoretical MW: 219268
  • GRAVY: -0.755262

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Energy metabolism Amino acids and amines L-serine dehydratase, iron-sulfur-dependent, beta subunit (TIGR00719; EC 4.3.1.17; HMM-score: 21.9)
    Metabolism Energy metabolism Glycolysis/gluconeogenesis L-serine dehydratase, iron-sulfur-dependent, beta subunit (TIGR00719; EC 4.3.1.17; HMM-score: 21.9)
  • TheSEED: data available for Hungary19A-6
  • PFAM:
    no clan defined Collagen; Collagen triple helix repeat (20 copies) (PF01391; HMM-score: 149.8)
    and 3 more
    SH3DP; SH3 fold domain associated with phage DNA polymerases (PF20287; HMM-score: 29.4)
    GBD (CL0202) DUF642; Protein of unknown function (DUF642) (PF04862; HMM-score: 16.6)
    no clan defined Auxin_resp; Auxin response factor (PF06507; HMM-score: 14.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.006881
    • TAT(Tat/SPI): 0.000672
    • LIPO(Sec/SPII): 0.000956
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_284060563 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MLLTIHDANLQKVAFIDNEKQGTLNYYDDTWTRSLATGSSTFEFTVFKKAVKSDLPLAKAYHHLNEHAFVSFKYKGKSFVFNIMIVEENEQTIKCYCENLNLELINELANPYKSNKAMTFKEYCEAMDLLNYTHLSIGINEISDYKRTLEWEGQETKLARLLSLAKRFDAEIEFDTQLNADSTIKKFSVNVYHENDDNHQGVGRVRNDVIVKYGKNIHSITRKVDKTGIFNTIRPTGKMPTVEEEPSGDKGSKSETVKNADGSTTKTTISTASDGTKSKTIVHTKVTKLADKTRITTTTTTRSDGSIEQTVTTSKKGGASTSETKVLKKPNPKEKTNTTEDVLTIEGLDEWEVKNEKGIVEFYQRGQALYAPISMQLYPSTFTHSTGELDQWTRKDFHFETDEPNELRRLGYLKLKKYCYPAITYEVDGFVDADIGDTVKVHDDGFAPLLMIQARVTDQKISFTNPLRNKTIFDNFKALENKLSADIQSAFERLFEAAKPYTIKLSTDNGVIFKNQIGQSLVTPTLYKGGKPVVVGVTWRWALDGEVTTGMTYLVRGSNVTDTVTLTVAAYIGNKEVAVDEISLVNVADGKLGTPGTPGRDGRTPYVHTAWANNATGTDGFSLDSSINKLYIGIYTDFEPNDSTDPKKYKWAKVKGDKGDKGEKGEPGQRGLDGLQGARGEQGLPGRNGADGRTQYTHIAYSNSADGTKDFSVSASDRAYIGMYVDFNSADSNTPSDYNWTLVKGADGANGVAGKAGTDGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDYRVYKWTLIKGADGTGISNVTNYYLATTVSTGITRTSAGWTTTPQPITSDKRYLWNYRVELYTNGTSKTTEPTVIGVHGEKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGEPGQRGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGEPGQRGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGEPGQRGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGEPGQRGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGKAGADGRTSYFHIAYAASADGSREFSLEDNRQQYMGYYSDFTAADSRDRTKYKWFDRLANVQVGSQNLLRNTATLPIKNGLDGTWRSTSGGNGVAEPVTLDKYPVPGILKGVRVKNNTNGGNKDLSQIINLVIGQRYTISCWARVSSTSDRSTVNLLVRSWTVNDTNRILFKAISNKTWVKYSLSFTADAEKNSIQFGQNGPGNIEICGMKLELGNVATDWSLSVEDIQSQLDGKADQKLTQQQLTALTEKAQLHDAELKAKATMEQLSDLEKAYNAFVKSNADSRKKSESDLVEAGRRIDLLTTQFGGLADLKTFIDTYMKSTNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVINIDNGIFTASIQIGRFRTEQYHLNKDVNVIRYIGG

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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