⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae SPN994038
- locus tag: SPN994038_RS05525 [old locus tag: SPN994038_10280 ]
- pan locus tag?: PNEUPAN002295000
- symbol: SPN994038_RS05525
- pan gene symbol?: zmpA
- synonym: iga
- product: ZmpA/ZmpB/ZmpC family metallo-endopeptidase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN994038_RS05525 [old locus tag: SPN994038_10280 ]
- symbol: SPN994038_RS05525
- product: ZmpA/ZmpB/ZmpC family metallo-endopeptidase
- replicon: chromosome
- strand: +
- coordinates: 1044497..1050256
- length: 5760
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_021026 (1044497..1050256) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
4321
4381
4441
4501
4561
4621
4681
4741
4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701ATGGAAAAGTATTTTGGTGAAAAACAAGAGCGTTTTTCATTTAGAAAATTATCAGTAGGA
CTTGTATCTGCAACGATTTCAAGTTTATTTTTTATGTCTGTATTAGCTAGTTCATCTGTG
GATGCTCAAGAAACTGCGGGAGTTCACTATAAATATGTGGCAGATTCAGAGCTATCATCA
GAAGAAAAGAAGCAGCTTGTCTATGATATTCCGACATACGTGGAGAATGATGATGAAACT
TATTATCTTGTTTATAAGTTAAATTCTCAAAATCAACTGGCGGAATTACCAAATACTGGA
AGCAAGAATGAGAGGCAAGCCCTAGTTGCTGGTGCTAGCTTAGCTGCTCTGGGAATTTTA
ATTTTTGCTGTTTCCAAGAAAAAGGTTAAGAATAAAACGGTATTACATTTAGTATTGGTT
GCGGGAATAGGAAATGGTGTCTTAGTTTCAGTCCATGCTTTAGAAAATCATCTTTTGCTA
AATTACAATACGGACTATGAATTGACCTCTGGAGAAAAATTACCTCTTCCTAAAGAGATT
TCAGGTTACACTTATATTGGATATATCAAAGAGGGAAAAACGACTTCTGATTTTGAAGTA
AGTAATCAAGAAAAATCAGCAGCCACTCCTACAAAACAACAAAAGGTGGATTATAATGTT
ACACCAAATTTTGTAGACCATCCATCAACAGTACAAGCTATTCAGGAACAAACACCTGTT
TCTTCAACTAAGCCGACAGAAGTTCAAGTAGTTGAAAAACCTTTCTCTACTAAATTAATC
AATCCAAGAAAAGAAGAGAAACAATCTTCAGATTCTCAAGAACAATTAGCCGAACATAAG
AATCTAGAAACGAAGAAAGAGGAGAAGATTTCTCCAAAAGAAAAGACTGGGGTAAATACA
TTAAATCCACAGGATGAAGTTTTATCAGGTCAATTGAACAAACCTGAACTCTTATATCGT
GAGGAAACTATAGAGACAAAAATAGATTTTCAAGAAGAAATTCAAGAAAATCCTGATTTA
GCTGAAGGAACTGTAAGAGTAAAACAAGAAGGTAAATTAGGTAAGAAAGTTGAAATCGTC
AGAATATTCTCTGTAAACAAGGAAGAAGTTTCGCGAGAAATTGTTTCAACTTCAACGACT
GCGCCTAGTCCAAGAATAGTCGAAAAAGGTACTAAAAAAACTCAAGTTATAAAGGAACAA
CCTGAGACTGGTGTAGAACATAAGGACGTACAGTCTGGAGCTATTGTTGAACCCGCAATT
CAGCCTGAGTTGCCCGAAGCAGTAGTAAGTGATAAAGGCGTACCAGAAGTTCAACCAGCG
TTATCGGAAGCAGTCGTAACCGACAAAGGTGAGACTGAGGTTCAACCAGAGTCGTCAGAT
ACTGTGGTAAGTGATAAAGGTGAACCTAAACAGGTAGCACCGCTTCCAGAATATAAGGGT
AATATTGAGCAAGTAAAACCTGAAACTCCGGTTGAGAAGACCAAAGAACAAGGTCCAGAA
AAAACTGAAGAAGTTCCAGTAAAACCAACAGAAGAAACACCAGTAAATCCAAATGAAGGT
ACTACAGAAGGAACCTCAATTCAAGGAGCAGAAAATCCAGTTCAACCTGCAGAAGAATCA
ACAACGAATTCAGAGAAAGTATCACCAGATACATCTAGCGAAAATACTGGGGAAGTATCC
AATAAACCTAGTGATTCAAAACCACCAGTTGAAGAATCAAATCAACCAGAAAATTCAGGT
AATACAACATCAGAGAATGGACAAACAGAACCAGAACCATCAAACGGAAATTCAACTGAG
AATGTTTCAACCAAATCAAACACATCCAATTCAAATGGAAACGAAGAAATTAAACAAGAA
AATGAACTAGACCCCGATAAAAAGGTAGAAGATCCAGAGAAAACACTTGAATTAAGAAAT
GTTTCCGACCTAGAGTTATACAGTTTGTCAAATGGTACTTATAAACAACACATTTCGTTA
GAACAAGTTCCAAGCAATCCAAATAGCTACTTTGTTAAAGTGAAATCTTCTTCATTCAAA
GATGTATACCTACCAGTAGCATCAATATCAGAGGAAAGAAAAAATGATAAAATCCTTTAT
AAAATCACAGCAAAAGTAGAGAAGCTTCAGCAGGAGATAGAAAGCAGATATAAAGATAAT
TTTACCTTCTATCTAGCTAAGAAGGGAACAGAAGAAACAACAAACTTTACTTCCTTTAGT
AATCTGGTCAAAGCTATAAACCAAAATCTCTCTGGAACCTATCATTTAGGAGCTAGCCTG
AATGCTAACGAAGTGGAGCTTAGTACTGATGATAAATCCTATATCAAGGGAACCTTTACT
GGTCAGTTGATTGGTGAAAAAGATGGTAAGCATTATGCTATTTACAACTTGAAAAAGCCT
CTTTTTGAAAGCTTGAGAGGGGCCACAATAGAAAAGTTGAGTCTGAAAAATGTCTCTATT
TCAGGGAAAGATGATATCGGTTCACTGGCAAATGAAGCTCAGAATAACACAAAAATTAAG
CAAGTTCATGTGGATGGTGTACTTGCCGGTGAACGTGGTATCGGTGGTTTGTTGGCTAAG
GCAGATCAATCAAGCATCACAGAGAGTAGTTTCAAGGGAAGAATTGTCAATACCTATGAA
ACAACCGCTTCCTATAATATCGGTGGCCTGGTCGGTCATTTGACAGGAAGCAAAGCTTCA
CTGACTAAGTCAAAAGCGACAGTGGTCATTTCATCAAATACAAATAGTTCTGACCAGACC
GTTGGAGGTATCGCTGGTCTTGTAGACAAAGATGCGCATATTCAGAATAGCTATTCTGAA
GGGGATATTAATAATAGTCAACGTTTTGGAAAAGTTGCTGGTATAGCAGGTAACTTATGG
GATCGTGAATCAAATAGTGAAAATCATGCTGGAAGATTGACTAATGTGCTTAGTGATGTC
AATGTAACTAATGGAAATGCCATTAGTGGTTACCATTATAATGGAATGAAAATTACTGAT
GCATTTAGTAATAAAGCGAATAAAGTTTTCAATGTCACTTTAGAGAAGGATGAGGTCGTC
AGCAAAGAATCCTTTGAGGAAAGAGGAACAATGCTAGATGCTTCTCAAATTGCAAGCAAA
AAAGCAGAAATCAATCTTCTCACTCCACCAATAGTGAAACCCCTCTCAACAAGCGGTAAG
AAAGACAGTGATTTTTCTAAGATAGCCCATTATCAAGCCAACCGTGCTTTGGTTTATAAG
AACATTGAAAAATTGTTACCTTTCTATAACAAGGCGACCATCGTGAAATACGGAAACCTG
GTTAAGGAGAACAGTATCTTATATCAAAAAGAACTCTTGTCTGCAGTTATGATGAAGGAT
GACCAAGTAATCACAGATATTATTTCCAACAAACAGACTGCAAACAAACTCTTGCTTCAC
TACAAGGACCATTCATCTGAAAAGTTTGATCTCAGGTACCAGGCTGATTTTGCTAAGTTA
GCAGAATATAGTCTAGGAGATACTGGTCTTCTCTATACGCCAAACCAATTCTTGTATGAC
CAAGACTCTATCATCAATCAAGTTTTACCTGAATTACAGCAGGTTGCCTACGATTCAGAA
GCTATCAGAAAGACACTCGGAATTTCTCCAGAGGTCAAGCAAACTGAGCTCTATATGGAA
GACCAGTTTACCAAAACAAAGCAAGATTTGGCAAACAGTTTGAAAAAACTCTTGTCTGCA
GATGCTGGACTTGCTGGTGACAACCCAGTTACCAGAGGCTATCTTGTAGATAAAATCAAG
AACAATAAGGAAGCCTTACTACTCGGTTTAACTTATTTAGAACGTTGGTATAACTTTAGC
TATGGTCAAGTGAATGTCAAAAACCTAGTTATGTATCATCTGGACTTCTTTGGTAAAGGA
AATACCTCACCATTAGATACTCTGATTGAGTTAGGTAAATCTGGCTTTAACAATCTTCTT
GCTAAAAACAATGTCGATACTTATGCTATCAGTCTTGCCAGCCATCATGGAACGACAGAT
TTGTTTAGCACGTTGGAAAATTACCGAAAAGTCTTTCTACCAGACAAAACCAATAATGAC
TGGTTTAAATCACAGACTAAGGCTTACATTGTCGAAGAAAAATCCAATATCGAAGAGGTG
AAAACGAAGCAAGGACTAGTTGGTACTAAGTATTCTATTGGTGTCTATGATCGAATCACT
AGCGACAGCTGGAAATACCGTAATATGGTACTACCTCTACTTACCTTGCCAGAAAGATCC
GTATTTGTCATTTCAACCATATCTAGTCTAGGTTTTGGTGCTTATGATCGCTATCGTAAT
AAAGAACATCAAGCAAATGGTGATCTTAATAGCTTTGTTGAAAAGAGTGCTCACGAAACA
GCAGAGCGTCAACGAGATCACTATGATTATTGGTATCGTATTCTAGATGAAAAAGGGCGT
GAAAAGCTTTATCGAAATATCTTGCTTTATGATGCCTATAAATTTGGAACTGATCATACT
GAAGGAAAGGCTACAGAAGTAGCAAATTTTGATAATCCAAATCCTGCAATGAAACATTTC
TTTGGACCTGTTGGAAATAAGGTTGGACATAATGGACATGGTGCTTATGCTACAGGGGAT
GCCGTTTATTATATGGGTTATCGTATGTTGGACAAGGACGGCGCCATTACTTATACGCAT
GAGATGACACATGACTCAGATCAGGACATTTATCTTGGAGGTTATGGAAGAAGAAGTGGA
CTTGGACCTGAGTTCTTTGCTAAAGGCTTACTACAAGCACCAGACCAACCAAGTGATGCA
ACCATTACCATCAACTCTATCTTGAAACATAAAACATCAGATAGTACAGAAGGTCAGCGA
TTGCAAGTACTTGATCCAACTACAAGATTTAATGACGCAGCAGATCTTCAGAACTACGTC
CACAATATGTTTGATGTCGTTTACATGTTGGAATATCTCGAAGGGCAATCTATCGTGAAA
CAGTTAGATGCTTATCAGAAAATGACGGCCCTGAGAAAAATCGAGAATAAATACGTGAAA
GATCCTGCAGATGGAAATGATGTTTATGCTACTAATGTTGTGAAAAATTTGACTGAAGAT
GAAGCTAAAAAATTGACGAGCTTTGATAGTTTGATTGACAATAACATTCTTTCGGCTCGT
GAGTATAAGGCTGGCACTTATGAGAGAAATGGCTACTTTACTATAAAACTCTTTGCACCA
ATCTTTTCAGCATTGAGCAGTGAGAAAGGAACTCCAGGCGACCTTATGGGACGTCGTATA
GCCTATGAACTACTAGCTGCTAAAGGCTTTAAAGATGGTATGGTACCATATATCTCAAAT
CAATACGAAGAAGATGCTAAACAACAAGGGCAAACTATCAATCTTTATGGTAAAGAACGG
GGCTTGGTGACCGATGAGCTTGTTTTGAAAAAGGTATTTGATGGTAAGTATAAAACTTGG
GCAGAATTTAAGACAGCTATGTACCAAGAACGGGTGGATCAGTTTGGAAACTTGAAGCAG
GTGACCTTTAAAGATCCGACAAAACGATGGCCAAGCTATGGCACAAAGACTATCAATAAT
GTGGATGAATTGCAGAAACTAATGGATGAAGCTGTTTTGCAGGATGCTACAGGTACACGT
TGGAGTAATTATAATCCAGAAATAGACAGTGCAGTTCATAAGTTGAAGAGAGCAATCTTT
AAAGCCTATCTTGCTCAAACCAATGATTTTAGAAGTTCAATTTTTGAGAATAAAAAATAG60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1080
1140
1200
1260
1320
1380
1440
1500
1560
1620
1680
1740
1800
1860
1920
1980
2040
2100
2160
2220
2280
2340
2400
2460
2520
2580
2640
2700
2760
2820
2880
2940
3000
3060
3120
3180
3240
3300
3360
3420
3480
3540
3600
3660
3720
3780
3840
3900
3960
4020
4080
4140
4200
4260
4320
4380
4440
4500
4560
4620
4680
4740
4800
4860
4920
4980
5040
5100
5160
5220
5280
5340
5400
5460
5520
5580
5640
5700
5760
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN994038_RS05525 [old locus tag: SPN994038_10280 ]
- symbol: SPN994038_RS05525
- description: ZmpA/ZmpB/ZmpC family metallo-endopeptidase
- length: 1919
- theoretical pI: 5.39069
- theoretical MW: 213969
- GRAVY: -0.653153
⊟Function[edit | edit source]
- TIGRFAM: gram-positive signal peptide, YSIRK family (TIGR01168; HMM-score: 44.5)and 1 moreCell envelope Other LPXTG cell wall anchor domain (TIGR01167; HMM-score: 21.7)
- TheSEED: data available for D39, TIGR4
- PFAM: no clan defined Peptidase_M26_C; M26 IgA1-specific Metallo-endopeptidase C-terminal region (PF07580; HMM-score: 1067.5)and 5 morePeptidase_M26_N; M26 IgA1-specific Metallo-endopeptidase N-terminal region (PF05342; HMM-score: 271.5)G5 (CL0593) G5; G5 domain (PF07501; HMM-score: 55.2)no clan defined Glug; The GLUG motif (PF07581; HMM-score: 41.1)YSIRK_signal; YSIRK type signal peptide (PF04650; HMM-score: 36.1)Gram_pos_anchor; LPXTG cell wall anchor motif (PF00746; HMM-score: 29.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cellwall
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 10
- Extracellular Score: 0
- Internal Helices: 2
- DeepLocPro: Cell wall & surface
- Cytoplasmic Score: 0.0001
- Cytoplasmic Membrane Score: 0.0059
- Cell wall & surface Score: 0.8489
- Extracellular Score: 0.1451
- SignalP: Signal peptide SP(Sec/SPI) length 42 aa
- SP(Sec/SPI): 0.91723
- TAT(Tat/SPI): 0.067255
- LIPO(Sec/SPII): 0.005174
- Cleavage Site: CS pos: 42-43. VDA-QE. Pr: 0.9143
- predicted transmembrane helices (TMHMM): 3
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000417148 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MEKYFGEKQERFSFRKLSVGLVSATISSLFFMSVLASSSVDAQETAGVHYKYVADSELSSEEKKQLVYDIPTYVENDDETYYLVYKLNSQNQLAELPNTGSKNERQALVAGASLAALGILIFAVSKKKVKNKTVLHLVLVAGIGNGVLVSVHALENHLLLNYNTDYELTSGEKLPLPKEISGYTYIGYIKEGKTTSDFEVSNQEKSAATPTKQQKVDYNVTPNFVDHPSTVQAIQEQTPVSSTKPTEVQVVEKPFSTKLINPRKEEKQSSDSQEQLAEHKNLETKKEEKISPKEKTGVNTLNPQDEVLSGQLNKPELLYREETIETKIDFQEEIQENPDLAEGTVRVKQEGKLGKKVEIVRIFSVNKEEVSREIVSTSTTAPSPRIVEKGTKKTQVIKEQPETGVEHKDVQSGAIVEPAIQPELPEAVVSDKGVPEVQPALSEAVVTDKGETEVQPESSDTVVSDKGEPKQVAPLPEYKGNIEQVKPETPVEKTKEQGPEKTEEVPVKPTEETPVNPNEGTTEGTSIQGAENPVQPAEESTTNSEKVSPDTSSENTGEVSNKPSDSKPPVEESNQPENSGNTTSENGQTEPEPSNGNSTENVSTKSNTSNSNGNEEIKQENELDPDKKVEDPEKTLELRNVSDLELYSLSNGTYKQHISLEQVPSNPNSYFVKVKSSSFKDVYLPVASISEERKNDKILYKITAKVEKLQQEIESRYKDNFTFYLAKKGTEETTNFTSFSNLVKAINQNLSGTYHLGASLNANEVELSTDDKSYIKGTFTGQLIGEKDGKHYAIYNLKKPLFESLRGATIEKLSLKNVSISGKDDIGSLANEAQNNTKIKQVHVDGVLAGERGIGGLLAKADQSSITESSFKGRIVNTYETTASYNIGGLVGHLTGSKASLTKSKATVVISSNTNSSDQTVGGIAGLVDKDAHIQNSYSEGDINNSQRFGKVAGIAGNLWDRESNSENHAGRLTNVLSDVNVTNGNAISGYHYNGMKITDAFSNKANKVFNVTLEKDEVVSKESFEERGTMLDASQIASKKAEINLLTPPIVKPLSTSGKKDSDFSKIAHYQANRALVYKNIEKLLPFYNKATIVKYGNLVKENSILYQKELLSAVMMKDDQVITDIISNKQTANKLLLHYKDHSSEKFDLRYQADFAKLAEYSLGDTGLLYTPNQFLYDQDSIINQVLPELQQVAYDSEAIRKTLGISPEVKQTELYMEDQFTKTKQDLANSLKKLLSADAGLAGDNPVTRGYLVDKIKNNKEALLLGLTYLERWYNFSYGQVNVKNLVMYHLDFFGKGNTSPLDTLIELGKSGFNNLLAKNNVDTYAISLASHHGTTDLFSTLENYRKVFLPDKTNNDWFKSQTKAYIVEEKSNIEEVKTKQGLVGTKYSIGVYDRITSDSWKYRNMVLPLLTLPERSVFVISTISSLGFGAYDRYRNKEHQANGDLNSFVEKSAHETAERQRDHYDYWYRILDEKGREKLYRNILLYDAYKFGTDHTEGKATEVANFDNPNPAMKHFFGPVGNKVGHNGHGAYATGDAVYYMGYRMLDKDGAITYTHEMTHDSDQDIYLGGYGRRSGLGPEFFAKGLLQAPDQPSDATITINSILKHKTSDSTEGQRLQVLDPTTRFNDAADLQNYVHNMFDVVYMLEYLEGQSIVKQLDAYQKMTALRKIENKYVKDPADGNDVYATNVVKNLTEDEAKKLTSFDSLIDNNILSAREYKAGTYERNGYFTIKLFAPIFSALSSEKGTPGDLMGRRIAYELLAAKGFKDGMVPYISNQYEEDAKQQGQTINLYGKERGLVTDELVLKKVFDGKYKTWAEFKTAMYQERVDQFGNLKQVTFKDPTKRWPSYGTKTINNVDELQKLMDEAVLQDATGTRWSNYNPEIDSAVHKLKRAIFKAYLAQTNDFRSSIFENKK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Jeffrey N Weiser, Deborah Bae, Claudine Fasching, Ronald W Scamurra, Adam J Ratner, Edward N Janoff
Antibody-enhanced pneumococcal adherence requires IgA1 protease.
Proc Natl Acad Sci U S A: 2003, 100(7);4215-20
[PubMed:12642661] [WorldCat.org] [DOI] (P p)Damiana Chiavolini, Guido Memmi, Tiziana Maggi, Francesco Iannelli, Gianni Pozzi, Marco R Oggioni
The three extra-cellular zinc metalloproteinases of Streptococcus pneumoniae have a different impact on virulence in mice.
BMC Microbiol: 2003, 3;14
[PubMed:12841855] [WorldCat.org] [DOI] (I e)E N Janoff, J B Rubins, C Fasching, D Charboneau, J T Rahkola, A G Plaut, J N Weiser
Pneumococcal IgA1 protease subverts specific protection by human IgA1.
Mucosal Immunol: 2014, 7(2);249-56
[PubMed:23820749] [WorldCat.org] [DOI] (I p)H Lomholt
Evidence of recombination and an antigenically diverse immunoglobulin A1 protease among strains of Streptococcus pneumoniae.
Infect Immun: 1995, 63(11);4238-43
[PubMed:7591053] [WorldCat.org] [DOI] (P p)K Poulsen, J Reinholdt, M Kilian
Characterization of the Streptococcus pneumoniae immunoglobulin A1 protease gene (iga) and its translation product.
Infect Immun: 1996, 64(10);3957-66
[PubMed:8926055] [WorldCat.org] [DOI] (P p)J H Wani, J V Gilbert, A G Plaut, J N Weiser
Identification, cloning, and sequencing of the immunoglobulin A1 protease gene of Streptococcus pneumoniae.
Infect Immun: 1996, 64(10);3967-74
[PubMed:8926056] [WorldCat.org] [DOI] (P p)