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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 13-DEC-2020
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae SPNA45
- locus tag: SPNA45_RS05645 [old locus tag: SPNA45_01005 ]
- pan locus tag?: PNEUPAN001606000
- symbol: SPNA45_RS05645
- pan gene symbol?: zmpB
- synonym:
- product: LPXTG cell wall anchor domain-containing protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS, pseudogene
- locus tag: SPNA45_RS05645 [old locus tag: SPNA45_01005 ]
- symbol: SPNA45_RS05645
- product: LPXTG cell wall anchor domain-containing protein
- replicon: chromosome
- strand: +
- coordinates: 998746..1003780
- length: 5035
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_018594 (998746..1003780) NCBI
- BioCyc: SPNA45_RS05645 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0577 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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4981GTGTTTAAAAAAGACCGTTTTTCAATTCGTAAGATTAAGGGAGTTGTAGGCTCTGTATTT
CTTGGAAGCCTTTTGATGGCTCCTTCTGTAGTGGACGCAGCCACCTATCACTATGTAAAT
AAAGAGATTATTTCACAAGAAGCTAAAGATTTAATTCAGACAGGAAAGCCTGACAGGAAT
GAAGTTGTATATGGTTTGGTGTATCAAAAAGATCAGTTGCCTCAAACAGGGACAGAAGCA
TCTGTTTTGACAGCTTTTGGTTTGCTGACTGTTGGGAGCTTGCTTTTAATCTACAAGAGA
AAGAAAATTGCTAGCGTCTTTCTAGTTGGAGCTATGGGATTGGTAGTTCTTCCTAGTGCA
GGGGCTGTAGACCCAGTTGCGACCCTAGCGCTGGCTAGTCGAGAGGGTGTTGTTGAAATG
GATGGCTATCGCTATGTTGGTTATCTATCAGGTGACATCCTCAAAACGCTTGGCTTGGAC
ACTGTTTTAGAAGAAACCTCAGCAAAACCTGGAGAGGTGACTGTAGTCGAAGTTGAGACT
CCTCAATCAACAACAAATCAGGAGCAAGCTAGGACAGAAAACCAAGTAGTAGAGACAGAG
GAAGCTCCAAAAGAAGAAGCACCTAAAACAGAAGAAAGTCCAAAGGAAGAACCAAAATCG
GAGGTAAAACCTACTGACGACACCCTTCCTAAAGTAGAAGAGGGGAAAGAAGATTCAGTA
GAATCAGCTCCAGTTGAAGAAGTAAGTGGAGCAGTTGATTCAAAAACAGATGAACAAGCA
CCAGTCAAGCCAGAAAGTCAACCATCAGATAAACAAGCTGAGGAGCCAAACGTTGAACCA
CCAGTAGAACAACCAAAAGTGGAAACGCCTGCTGTAGAAAAACAAACGGAACCAACAGAG
GAACCAAAAGTTGAAGTAACAAGTATTCCCCAAACTACTCGCTATGAGGAAGACCTTACT
AAGGAACACGGAACGCGTGAAGTTGTTAAGGAAGGTAAGAATGGCAGTAGAACAGTTACT
ACTCCATATATCTTGAATGCGACAGATGGTACGACTACAGAAGGCACTTCGACAACTGAT
GAAGCTGAGATGGAGAAAGAGGTTGTTCGTGTTGGCACGAAACCCAAAGAAAAATTAGCT
CCAGTCTTAAGTTTGACAAGTGTTACAGATAATGCAATGTTGCGTAGTGCGAGACTTACT
TATCATTTGGAAAATACAGACAGTGTTGATGTGAAAAAAATTCATGCTGAAATTAAAAAT
GGCGATAAGGTTGTCAAAACTATTGACTTATCTAAAGAGAGATTATCAGATGCTGTTGAC
GGTCTTGAACTTTATAAAGATTATAAGATTGTGACGAGTATGACCTATGATAGAGGTAAT
GGTGAAGAAACCTCTACGTTGGAAGAAACTCCACTACGATTAGACCTCAAGAAGGTTGAA
TTGAAAAACATCGGCTCTACTAATCTCGTCAAAGTAAATGAGGATGGTACTGAGGTGGCA
AGTGACTTCTTAACAAGTAAACCTGTGGATGTGCAGAATTACTACCTCAAAGTAACTTCA
CGTGATAATAAAGTGTTTCGCCTCACAGTTGAAAAAATTGAAGAGGTGACTGAGGAAGGT
CAACCACTTTACAAAGTCACTGCTAAGGCTCCTAATTTGATTCAGCACACGGATGCGACT
AAAATGCAAGACGAATACGTGTATTATATTGAAAAAACACGTGCAACAGATGGTGATATT
TACTACAACTTTAACGACTTAGTAAACGCCATGAACAAAAACAAAACTGGTACATTCAAA
CTTGGTGCTGATTTGAACGCTACAGGTGTACCGACACCTGCTAAGTCGTATGTTACAGGT
GATTTCCGAGGTACTTTGACAAGTGTTGATGGTGAACATTACACAATTCATAATACAAGT
CGCCCATTGTTTAATAATATTATAGGTGGGACTATCAAAGATATTAACCTTGGCAATGTT
AATATTCACATGCCATGGGCAAATAACGTTGCATCGTTAGCTAATATTATTAAAGGTGGA
ACCACTATTGAAAATGTCAAAGTTACAGGTAATGTTCTTGGTAAAGACTGGGTATCTGGA
TTTATAGATAAAATAGATAGTGGCGGTACATTGAGAAATGTAGCTTTTATTGGGAATGTG
ACCTCTGTTGGTACAGGTGGTTCGTTCTTGACTGGTATTGTTGGTGAAAACTGGAAGGGA
CTGGTAGAACAGACTTATGTAGATGCCAATATTCGAGGGAAGAAAGCTAAGGCTGCAGGT
ATAGCTTACTGGTCGCAAAATGGAGGCGATAACTATGCTGTAGGTAGATATGGAGCAATT
AAGAAATCTGTCGTTAAAGGTTCAATAGATGTAGAAAAACCAATTGAAGTTGGTGGCGCT
ATTGGAAGTTTAAATTATCTTGGTTATATAGAAGACACTGTTGCTATGATGAAAGTTAAG
AACGGTGAAATTTTCTACGGTTCGCATGATATCGATACCGATCCATATTACACAGGAGAA
CGAGTAAATAGAAATTTCATTGTTGACGGTGTACAAAGCAGACCGTGAACTTGCTTATCG
TAATATCGAAAAACTTCAACCATTCTACAATAAAGAGTGGATTGTAGACCAAGGTAATAA
AGTTCCATCAAATTCTAAATTATTAACTACAGAAGTATTATCTGTTACAGGTATGAAAGA
TGGTCAATTTGTGACTGACTTATCAGAAATTGATAAAATTATGATTCACTATGCGGATGG
CACCAAAGAAGAAATGAACGTGACAGCGGTTGCTGATTCTAAGGTGAAACAAGTTCGTGA
GTATGACGTGACTGATTTGGGTGTTGTTTACACTCCGAATATGGTTGATAAAAACCGCGA
CCAATTGATTGCAGATGTGAAAGCGAAATTGTCGTCAGTTGAATTGATTTCCCCTGAAGT
TCGTGCTCTTATGGATAAACGTGGTAAAGCTGAAGAAAATACGGAAGGTCGTCAAAATGG
ATACATTAGAGATCTATTCCTTGAAGAAAGCTTTGCTGAAGTGAAAGCTGGTTTGGGTAA
ATTGGTTAAAGCTTTGGTTGAAAACGAAGATCATCAATTAAATAGCGATGAAGCAGCAAT
GCGCGCGTTAATTAAGAAAGTTGAAGACAATAAAGCTAAAATCATGATGGGACTGGCCTA
CTTAAATCAATATTATAGTTTTAAATACGCTGAGTTATCAATTAAAGATATTATGATGTT
TAAACCTGATTTTTATGGTAAGAATGTTAATGTCTTAGATTTCTTAATCAAAATTGGTTC
AAGTGAAAGAAATGTTAAAGGTGATAGAACTTTAGAAGCTTATCGTGAAACTATCGGTGG
AACAATTGGAATAAATGAATTAAATGGATTCTTACATTACAATATGAAGCTATTTACTAA
CCATACAGATATAAATGACTGGTTTAAGAAAGCTATTGAAAAGAATGCTTATGTAGTTGA
ACAACCATCAACGAACCCTGCATTTGCCAACAAAAAATATCGTCTATACGAAGGAATTAA
TAATGGGCAACATGGGCGGATGATTTTACCTCTTCTTAACTTGAAAAATGCACATCTATT
TATGATTTCAACATACAACACTATCTCGTTTAGTTCGTTTGAAAAATATGGCAAAGACAC
AGATGAAAAACGTGAAAAGTTTAAGAGTGAGATCAATAAACGTGCTAAAGAGCAGGTTAA
TTACTTAGATTTTTGGTCACGTCTTGCTACTGATAATGTCCGTGATAAACTTCTTAAGAG
TCAAAATGTAGTTCCAACTCCTGTATGGGATAATCATAATAGCCCGAACGGATGGGCTAG
TAGACATGGTCATATAGATGGGAAACCGGATTATGCTCCAATTCGTGAGTTCTTTGGGCG
AATCAATAAGTATCATGGTTACAAATATGGATATGGCGCATATGCATATATTTTTGCAGC
ACCTCAACCGATGGATGCAGTTTATTTCGTTATGACAGATTTAATTAGTGACTTTGGAAC
ATCTGCATTTACACATGAAACTACTCACGTTAATGATCGTATGGCTTACTATGGTGGTCA
TTGGCATCGTGAAGGTACGGATCTTGAAGCATTTGCTCAGGGGATGTTACAAACACCATC
GGTATCAAATCCAAACGGAGAATATGGCGCATTAGGTCTAAATATGGCGTATGAACGTCA
AAATGATGGAAATCAATGGTATAATCCAAATCCTAACAAACTTAAATCTCGCGCTGAAAT
TGATCACTACATGAAGAACTACAATGAAGCTCTTATGATGTTAGATTATCTGGAAGCAGA
ATCTGTTTTACCTAAATTAAAAGGTAATAATGATAGATGGTTCAAGAAAATGGATAAACA
AATGCGTAAGGACGGACAACCTCACCAGTTTGACAAAATTCGCGATTTAAATAATGAAGA
GAAGAAAATTCAATTAGCTTCTATTGAGGATTTAGTTGATAATAACTTTATGACTAAACA
CGGTGCTCCTGGAAATGGTACATATAACCCATCAGATTTTAGTTCAGCATATGTTAATAT
GAATATGATGACTGGTGTATACGGAGGTAACTCAAGTGATGGGGCTCCTGGCGCTGCTTC
ATTTAAACATAATACTTTCCGTATGTGGGGATACTTCGGATACGAAAATGGATTCATCGG
ATATGCCTCTAATAAATATAAAGCCGAAGCCAATAAAGCAGGTCAAACTCTAAGTGATAA
ATATATCATCAATAAAGTTTCTGGTGGTACATTTAATACACTTGAAGCGTGGAAGAAAGA
ATGGTTTAAACAAATCAAAACTAAAGCTCAAAAAGGATTCACAGCAATTGAAATTGATGG
TAAAACTATTGATTCATATGAAAAATTAAAAGACTTATTTGATAAAGCTGTTGAAGAAGA
TCTTAAAGGAACTGGAACGGATAAGACTGTGAAACTTAAAGAAAAAGTATACAAACAACT
CCTTAAAAACACAGACGGCTTCTCTGGTGATCTATTTACTGCACCACAAGCATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNA45_RS05645 [old locus tag: SPNA45_01005 ]
- symbol: SPNA45_RS05645
- description: LPXTG cell wall anchor domain-containing protein
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for D39, Hungary19A-6, TIGR4
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0577 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Damiana Chiavolini, Guido Memmi, Tiziana Maggi, Francesco Iannelli, Gianni Pozzi, Marco R Oggioni
The three extra-cellular zinc metalloproteinases of Streptococcus pneumoniae have a different impact on virulence in mice.
BMC Microbiol: 2003, 3;14
[PubMed:12841855] [WorldCat.org] [DOI] (I e)C E Blue, G K Paterson, A R Kerr, M Bergé, J P Claverys, T J Mitchell
ZmpB, a novel virulence factor of Streptococcus pneumoniae that induces tumor necrosis factor alpha production in the respiratory tract.
Infect Immun: 2003, 71(9);4925-35
[PubMed:12933834] [WorldCat.org] [DOI] (P p)